Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 AC009161.1-201ENST00000417306 376 ntBASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 RPL27AP8-201ENST00000424277 446 ntBASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 AC104058.1-201ENST00000448028 297 ntBASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 RPS15AP27-201ENST00000449183 343 ntBASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 RN7SL98P-201ENST00000462271 300 ntBASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 AC010326.1-201ENST00000462726 602 ntBASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 RPL21P93-201ENST00000480465 489 ntBASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 SCARNA15.2-201ENST00000516409 127 ntBASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 RN7SKP289-201ENST00000517244 295 ntBASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 AC004024.1-201ENST00000549244 247 ntBASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 MIR3921-201ENST00000577308 85 ntBASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 MIR3690-201ENST00000580266 75 ntBASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 AL592436.1-201ENST00000605135 558 ntBASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 AC093913.1-201ENST00000614178 329 ntBASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 AC090132.2-201ENST00000615881 347 ntBASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 AP004289.2-201ENST00000444413 1457 ntBASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NKX1-2Q9UD57 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 SNORA60-201ENST00000362396 134 ntBASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 Y_RNA.167-201ENST00000363735 109 ntBASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 RNU6-512P-201ENST00000364438 103 ntBASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 Y_RNA.263-201ENST00000364659 114 ntBASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 MIR134-201ENST00000385258 73 ntBASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 SNORD70.1-201ENST00000391007 85 ntBASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 AC245054.1-201ENST00000420944 258 ntBASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 AL356387.2-201ENST00000422272 243 ntBASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 AP000907.1-201ENST00000428428 510 ntBASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 IFNA20P-201ENST00000436840 528 ntBASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 AC093019.1-201ENST00000443135 252 ntBASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 PRPS1P1-201ENST00000445305 876 ntBASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 RPL7P19-201ENST00000469948 618 ntBASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 AC009901.1-201ENST00000506703 541 ntBASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 AC093840.1-201ENST00000511599 336 ntBASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 RNU4-49P-201ENST00000516080 140 ntBASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 SCARNA13-201ENST00000516672 275 ntBASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 RNU7-30P-201ENST00000516835 62 ntBASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 AP006245.1-201ENST00000522549 120 ntBASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 AP004242.1-201ENST00000533701 349 ntBASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 CYCSP29-201ENST00000533731 318 ntBASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 AC005261.5-201ENST00000596280 355 ntBASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 AC009570.1-201ENST00000609599 745 ntBASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.57□□□□□ -1.84
NKX1-2Q9UD57 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NKX1-2Q9UD57 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NKX1-2Q9UD57 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.56□□□□□ -1.84
NKX1-2Q9UD57 AC073544.1-201ENST00000600110 1595 ntBASIC3.56□□□□□ -1.84
NKX1-2Q9UD57 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
NKX1-2Q9UD57 MTND4P29-201ENST00000503122 1372 ntBASIC3.56□□□□□ -1.84
NKX1-2Q9UD57 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NKX1-2Q9UD57 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NKX1-2Q9UD57 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NKX1-2Q9UD57 Y_RNA.61-201ENST00000362835 102 ntBASIC3.56□□□□□ -1.84
NKX1-2Q9UD57 RNA5SP515-201ENST00000364570 118 ntBASIC3.56□□□□□ -1.84
NKX1-2Q9UD57 SNORD6-201ENST00000365444 73 ntBASIC3.56□□□□□ -1.84
NKX1-2Q9UD57 Y_RNA.356-201ENST00000365475 113 ntBASIC3.56□□□□□ -1.84
NKX1-2Q9UD57 SNORA4.3-201ENST00000365564 137 ntBASIC3.56□□□□□ -1.84
NKX1-2Q9UD57 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
NKX1-2Q9UD57 Y_RNA.529-201ENST00000384586 119 ntBASIC3.56□□□□□ -1.84
NKX1-2Q9UD57 RNA5SP31-201ENST00000411144 127 ntBASIC3.56□□□□□ -1.84
NKX1-2Q9UD57 HSPE1P12-201ENST00000412576 301 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms