Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG3Q9NT62 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
ATG3Q9NT62 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATG3Q9NT62 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
ATG3Q9NT62 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATG3Q9NT62 AC233263.6-201ENST00000631132 1963 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.19□□□□□ -1.58
ATG3Q9NT62 Y_RNA.106-201ENST00000363189 100 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 RNU6-511P-201ENST00000363496 107 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 RNU5A-8P-201ENST00000364102 114 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 Y_RNA.350-201ENST00000365409 98 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 SNORA5A-201ENST00000384111 134 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 RNU6-33P-201ENST00000384793 107 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 MIR19A-201ENST00000384878 82 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 U3.20-201ENST00000390909 217 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.19□□□□□ -1.58
ATG3Q9NT62 RNU6-101P-201ENST00000410323 104 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 Y_RNA.594-201ENST00000410373 140 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 RPL31P45-201ENST00000419532 356 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.19□□□□□ -1.58
ATG3Q9NT62 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.19□□□□□ -1.58
ATG3Q9NT62 SNORD127-201ENST00000458892 86 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.19□□□□□ -1.58
ATG3Q9NT62 AC005726.1-201ENST00000494679 427 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 RNU4-77P-201ENST00000516692 156 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 RNU7-143P-201ENST00000516781 65 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 RN7SKP277-201ENST00000516895 283 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 RNA5SP179-201ENST00000517284 121 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 AC008694.2-201ENST00000517591 306 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 AC131281.1-201ENST00000522984 164 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 AC091516.1-201ENST00000549191 703 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.19□□□□□ -1.58
ATG3Q9NT62 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
ATG3Q9NT62 AC091167.4-201ENST00000605079 184 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.19□□□□□ -1.58
ATG3Q9NT62 AC098479.1-201ENST00000609225 154 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 PISRT1.1-201ENST00000616930 107 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATG3Q9NT62 Z73965.1-201ENST00000623412 2297 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
ATG3Q9NT62 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.19□□□□□ -1.58
ATG3Q9NT62 AC010615.1-201ENST00000594254 1764 ntBASIC5.19□□□□□ -1.58
ATG3Q9NT62 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATG3Q9NT62 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ATG3Q9NT62 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ATG3Q9NT62 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ATG3Q9NT62 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
ATG3Q9NT62 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
ATG3Q9NT62 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
ATG3Q9NT62 RNU1-15P-201ENST00000353977 144 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 Y_RNA.210-201ENST00000364161 110 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 Y_RNA.222-201ENST00000364264 102 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 SNORD115-7-201ENST00000365306 82 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 RNU1-115P-201ENST00000365329 160 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ATG3Q9NT62 SNORA9-201ENST00000384215 133 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 MIR450B-201ENST00000401182 78 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 AL023807.1-201ENST00000407932 359 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 AC114491.1-201ENST00000416095 246 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.18□□□□□ -1.58
ATG3Q9NT62 RPS15AP10-201ENST00000432472 382 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 RPL36AP13-201ENST00000457490 317 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.18□□□□□ -1.58
ATG3Q9NT62 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.18□□□□□ -1.58
ATG3Q9NT62 AC116337.1-201ENST00000509680 687 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 AC006499.6-201ENST00000511169 607 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 RNU7-51P-201ENST00000516560 62 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 Y_RNA.708-201ENST00000516950 96 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 AC087499.8-201ENST00000578406 226 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 AC125232.2-201ENST00000592457 143 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 AL355297.3-201ENST00000604082 446 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 AC007179.3-201ENST00000604976 235 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.18□□□□□ -1.58
ATG3Q9NT62 AP001486.3-201ENST00000615334 372 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 AC103705.1-201ENST00000619013 241 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 AC015967.1-201ENST00000619893 476 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 AL357559.1-201ENST00000622228 274 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 BMS1P21-201ENST00000634565 365 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 AL034408.1-202ENST00000636088 415 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
ATG3Q9NT62 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
ATG3Q9NT62 SAGE4P-201ENST00000442271 3381 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 MTND5P7-201ENST00000413558 1798 ntBASIC5.18□□□□□ -1.58
ATG3Q9NT62 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
ATG3Q9NT62 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
ATG3Q9NT62 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.17□□□□□ -1.58
ATG3Q9NT62 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATG3Q9NT62 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
ATG3Q9NT62 AC009902.3-201ENST00000606235 2172 ntBASIC5.17□□□□□ -1.58
ATG3Q9NT62 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.17□□□□□ -1.58
ATG3Q9NT62 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATG3Q9NT62 RPL21P1-201ENST00000399532 476 ntBASIC5.17□□□□□ -1.58
ATG3Q9NT62 AC069218.2-201ENST00000411665 344 ntBASIC5.17□□□□□ -1.58
ATG3Q9NT62 AC243428.1-201ENST00000421099 264 ntBASIC5.17□□□□□ -1.58
ATG3Q9NT62 AL590632.1-201ENST00000424289 371 ntBASIC5.17□□□□□ -1.58
ATG3Q9NT62 AC236972.1-201ENST00000433225 199 ntBASIC5.17□□□□□ -1.58
ATG3Q9NT62 AC108734.1-201ENST00000439549 399 ntBASIC5.17□□□□□ -1.58
ATG3Q9NT62 OSTCP8-201ENST00000445117 448 ntBASIC5.17□□□□□ -1.58
ATG3Q9NT62 BX276092.4-201ENST00000452056 248 ntBASIC5.17□□□□□ -1.58
ATG3Q9NT62 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms