Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AC090115.3-201ENST00000553218 849 ntBASIC0.61□□□□□ -2.31
SMCO4Q9NRQ5 MTCYBP22-201ENST00000603788 447 ntBASIC0.61□□□□□ -2.31
SMCO4Q9NRQ5 AP002826.1-201ENST00000608835 315 ntBASIC0.61□□□□□ -2.31
SMCO4Q9NRQ5 MIR6866-201ENST00000638146 69 ntBASIC0.61□□□□□ -2.31
SMCO4Q9NRQ5 RNU6-989P-201ENST00000362756 107 ntBASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 AL021407.1-201ENST00000404531 386 ntBASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 SNORA11.1-201ENST00000408133 129 ntBASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 PIGFP2-201ENST00000421400 651 ntBASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 AC099548.1-201ENST00000421443 426 ntBASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 RPL23AP16-201ENST00000441715 421 ntBASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 UBE2DNL-203ENST00000474922 222 ntBASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 RPS23P4-201ENST00000487908 423 ntBASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 AL442163.2-201ENST00000553912 710 ntBASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 AC091544.4-201ENST00000555268 342 ntBASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 AC004817.2-201ENST00000561794 651 ntBASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 AP005136.1-201ENST00000579765 429 ntBASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 MIR4303-201ENST00000581299 66 ntBASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 NTAN1P1-201ENST00000603150 646 ntBASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 FAM71BP1-201ENST00000604431 523 ntBASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 AC010809.3-201ENST00000621310 641 ntBASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 AC008443.7-201ENST00000622195 246 ntBASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
SMCO4Q9NRQ5 PAPPA-AS1-201ENST00000445861 2450 ntBASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 RNU6-173P-201ENST00000364215 104 ntBASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 CYCSP49-201ENST00000420810 319 ntBASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 AC013410.2-201ENST00000422627 201 ntBASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 RPS27P1-201ENST00000450552 247 ntBASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 AC005908.1-201ENST00000468701 347 ntBASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 AC104689.1-201ENST00000473356 768 ntBASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 AC117522.2-201ENST00000510049 657 ntBASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 RNA5SP112-201ENST00000515937 99 ntBASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 RNA5SP404-201ENST00000517118 132 ntBASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 AP003122.4-201ENST00000530980 758 ntBASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 AP003034.1-201ENST00000534621 422 ntBASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 AC211469.2-201ENST00000605461 205 ntBASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 AL020996.3-201ENST00000606617 222 ntBASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 AP000254.1-201ENST00000609934 520 ntBASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 AC099842.1-201ENST00000619919 596 ntBASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.59□□□□□ -2.31
SMCO4Q9NRQ5 RNU6-761P-201ENST00000384148 107 ntBASIC0.58□□□□□ -2.32
SMCO4Q9NRQ5 RNA5SP465-201ENST00000391195 109 ntBASIC0.58□□□□□ -2.32
SMCO4Q9NRQ5 AL136372.1-201ENST00000403060 228 ntBASIC0.58□□□□□ -2.32
SMCO4Q9NRQ5 RNU4-74P-201ENST00000411280 161 ntBASIC0.58□□□□□ -2.32
SMCO4Q9NRQ5 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
SMCO4Q9NRQ5 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.58□□□□□ -2.32
SMCO4Q9NRQ5 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC0.58□□□□□ -2.32
SMCO4Q9NRQ5 HMGB3P12-201ENST00000438745 556 ntBASIC0.58□□□□□ -2.32
SMCO4Q9NRQ5 AC009238.1-201ENST00000442165 424 ntBASIC0.58□□□□□ -2.32
SMCO4Q9NRQ5 AC009237.6-201ENST00000446969 424 ntBASIC0.58□□□□□ -2.32
SMCO4Q9NRQ5 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.58□□□□□ -2.32
SMCO4Q9NRQ5 RPL30P7-201ENST00000479312 323 ntBASIC0.58□□□□□ -2.32
SMCO4Q9NRQ5 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.58□□□□□ -2.32
SMCO4Q9NRQ5 RNF138P1-201ENST00000502765 546 ntBASIC0.58□□□□□ -2.32
SMCO4Q9NRQ5 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC0.58□□□□□ -2.32
SMCO4Q9NRQ5 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.58□□□□□ -2.32
SMCO4Q9NRQ5 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC0.58□□□□□ -2.32
SMCO4Q9NRQ5 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
SMCO4Q9NRQ5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
SMCO4Q9NRQ5 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.57□□□□□ -2.32
SMCO4Q9NRQ5 POLR2J4-204ENST00000418424 324 ntBASIC0.57□□□□□ -2.32
SMCO4Q9NRQ5 ZDHHC20P2-201ENST00000424108 429 ntBASIC0.57□□□□□ -2.32
SMCO4Q9NRQ5 AC008850.1-201ENST00000427546 362 ntBASIC0.57□□□□□ -2.32
SMCO4Q9NRQ5 RPS6P15-201ENST00000431996 751 ntBASIC0.57□□□□□ -2.32
SMCO4Q9NRQ5 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC0.57□□□□□ -2.32
SMCO4Q9NRQ5 AC108043.1-201ENST00000512696 574 ntBASIC0.57□□□□□ -2.32
SMCO4Q9NRQ5 AC117532.1-201ENST00000514638 323 ntBASIC0.57□□□□□ -2.32
SMCO4Q9NRQ5 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC0.57□□□□□ -2.32
SMCO4Q9NRQ5 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.57□□□□□ -2.32
SMCO4Q9NRQ5 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.57□□□□□ -2.32
SMCO4Q9NRQ5 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.57□□□□□ -2.32
SMCO4Q9NRQ5 CBX3P8-201ENST00000532412 525 ntBASIC0.57□□□□□ -2.32
SMCO4Q9NRQ5 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.57□□□□□ -2.32
SMCO4Q9NRQ5 AC105245.1-201ENST00000581934 244 ntBASIC0.57□□□□□ -2.32
SMCO4Q9NRQ5 AC138473.1-201ENST00000605717 526 ntBASIC0.57□□□□□ -2.32
SMCO4Q9NRQ5 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.57□□□□□ -2.32
SMCO4Q9NRQ5 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
SMCO4Q9NRQ5 AC005832.2-201ENST00000538921 1430 ntBASIC0.56□□□□□ -2.32
SMCO4Q9NRQ5 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
SMCO4Q9NRQ5 RNU1-36P-201ENST00000365130 165 ntBASIC0.56□□□□□ -2.32
SMCO4Q9NRQ5 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.56□□□□□ -2.32
SMCO4Q9NRQ5 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.56□□□□□ -2.32
SMCO4Q9NRQ5 AC023141.4-201ENST00000412031 328 ntBASIC0.56□□□□□ -2.32
SMCO4Q9NRQ5 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms