Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RNU6-607P-201ENST00000411283 108 ntBASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 CYCSP33-201ENST00000414485 327 ntBASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 AC099677.1-201ENST00000420575 175 ntBASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 BX679664.1-201ENST00000434429 253 ntBASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 AC004938.1-201ENST00000438468 308 ntBASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 AL354710.1-201ENST00000453641 246 ntBASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 RNU6-953P-201ENST00000459154 107 ntBASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 AC108751.2-201ENST00000469993 231 ntBASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 MIR3144-201ENST00000579460 79 ntBASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 AC098826.3-201ENST00000603823 466 ntBASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 MTND5P9-201ENST00000503854 1755 ntBASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 AC087190.4-201ENST00000574616 8334 ntBASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 Y_RNA.8-201ENST00000362353 102 ntBASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 RNU6-22P-201ENST00000384355 107 ntBASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 RNU6-102P-201ENST00000384485 104 ntBASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 RNU6-817P-201ENST00000391083 104 ntBASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 TMEM167AP1-201ENST00000423409 219 ntBASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 RN7SL610P-201ENST00000463845 291 ntBASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 RPL30P10-201ENST00000488148 337 ntBASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 RNA5SP43-201ENST00000516559 110 ntBASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 AC091144.1-201ENST00000519573 138 ntBASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 AC103783.1-201ENST00000520506 373 ntBASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 MIR4443-201ENST00000585052 53 ntBASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 U6.106-201ENST00000636360 105 ntBASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 SALL4P2-201ENST00000423288 2910 ntBASIC5.27□□□□□ -1.57
NUCKS1Q9H1E3 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 RNA5SP28-201ENST00000363841 119 ntBASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 Y_RNA.383-201ENST00000383855 97 ntBASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 RPL21P75-201ENST00000396599 483 ntBASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 RPL21P28-201ENST00000401418 483 ntBASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 AL590556.1-201ENST00000423231 483 ntBASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 RPS27P18-201ENST00000431701 247 ntBASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 AC007389.2-201ENST00000434630 306 ntBASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 RPL12P3-201ENST00000440080 396 ntBASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 FHP1-201ENST00000442741 703 ntBASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 snoU109.4-201ENST00000458953 143 ntBASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 RPL21P11-201ENST00000461458 483 ntBASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 RPL21P39-201ENST00000463605 483 ntBASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 AL049830.2-201ENST00000480072 201 ntBASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 AC132942.1-201ENST00000486753 483 ntBASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 AC093591.1-201ENST00000491435 481 ntBASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 RPL21P16-201ENST00000495531 483 ntBASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 RN7SL558P-201ENST00000497468 299 ntBASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 RNU6-479P-201ENST00000516348 105 ntBASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 RNU6-709P-201ENST00000517257 104 ntBASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 RPL23AP87-202ENST00000573039 466 ntBASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 AC123912.5-201ENST00000605470 343 ntBASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
NUCKS1Q9H1E3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 AC090971.4-201ENST00000560291 1800 ntBASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 RN7SKP104-201ENST00000362605 328 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms