Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NBPF3Q9H094 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.14□□□□□ -1.43
NBPF3Q9H094 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.14□□□□□ -1.43
NBPF3Q9H094 RNU6-755P-201ENST00000364400 103 ntBASIC6.14□□□□□ -1.43
NBPF3Q9H094 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NBPF3Q9H094 MIR513C-201ENST00000401352 84 ntBASIC6.14□□□□□ -1.43
NBPF3Q9H094 RN7SKP16-201ENST00000410180 299 ntBASIC6.14□□□□□ -1.43
NBPF3Q9H094 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC6.14□□□□□ -1.43
NBPF3Q9H094 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC6.14□□□□□ -1.43
NBPF3Q9H094 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.14□□□□□ -1.43
NBPF3Q9H094 RNU6-1218P-201ENST00000458990 108 ntBASIC6.14□□□□□ -1.43
NBPF3Q9H094 HMGB3P16-201ENST00000508037 287 ntBASIC6.14□□□□□ -1.43
NBPF3Q9H094 AC004980.4-201ENST00000513375 203 ntBASIC6.14□□□□□ -1.43
NBPF3Q9H094 RNU6-659P-201ENST00000516454 104 ntBASIC6.14□□□□□ -1.43
NBPF3Q9H094 snoU109.6-201ENST00000516831 118 ntBASIC6.14□□□□□ -1.43
NBPF3Q9H094 Y_RNA.709-201ENST00000516952 92 ntBASIC6.14□□□□□ -1.43
NBPF3Q9H094 RN7SKP258-201ENST00000517151 304 ntBASIC6.14□□□□□ -1.43
NBPF3Q9H094 IGLVIV-53-201ENST00000520107 367 ntBASIC6.14□□□□□ -1.43
NBPF3Q9H094 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.14□□□□□ -1.43
NBPF3Q9H094 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC6.14□□□□□ -1.43
NBPF3Q9H094 AC055872.1-201ENST00000570978 278 ntBASIC6.14□□□□□ -1.43
NBPF3Q9H094 AC090616.3-201ENST00000582184 217 ntBASIC6.14□□□□□ -1.43
NBPF3Q9H094 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.14□□□□□ -1.43
NBPF3Q9H094 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.14□□□□□ -1.43
NBPF3Q9H094 AC234771.5-201ENST00000600161 514 ntBASIC6.14□□□□□ -1.43
NBPF3Q9H094 AL591926.8-201ENST00000616876 211 ntBASIC6.14□□□□□ -1.43
NBPF3Q9H094 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NBPF3Q9H094 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
NBPF3Q9H094 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
NBPF3Q9H094 INTS6P1-201ENST00000504674 2530 ntBASIC6.14□□□□□ -1.43
NBPF3Q9H094 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
NBPF3Q9H094 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
NBPF3Q9H094 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NBPF3Q9H094 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
NBPF3Q9H094 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NBPF3Q9H094 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NBPF3Q9H094 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NBPF3Q9H094 Y_RNA.123-201ENST00000363338 102 ntBASIC6.13□□□□□ -1.43
NBPF3Q9H094 RNVU1-6-201ENST00000364688 164 ntBASIC6.13□□□□□ -1.43
NBPF3Q9H094 RN7SKP153-201ENST00000365026 316 ntBASIC6.13□□□□□ -1.43
NBPF3Q9H094 Y_RNA.534-201ENST00000384599 112 ntBASIC6.13□□□□□ -1.43
NBPF3Q9H094 RNU6-476P-201ENST00000384726 107 ntBASIC6.13□□□□□ -1.43
NBPF3Q9H094 SNORD56-201ENST00000413522 71 ntBASIC6.13□□□□□ -1.43
NBPF3Q9H094 AL590139.1-201ENST00000416267 400 ntBASIC6.13□□□□□ -1.43
NBPF3Q9H094 POLR2KP2-201ENST00000438155 177 ntBASIC6.13□□□□□ -1.43
NBPF3Q9H094 AL357134.1-201ENST00000445848 426 ntBASIC6.13□□□□□ -1.43
NBPF3Q9H094 RN7SL189P-201ENST00000468631 289 ntBASIC6.13□□□□□ -1.43
NBPF3Q9H094 RPL21P6-201ENST00000479171 504 ntBASIC6.13□□□□□ -1.43
NBPF3Q9H094 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC6.13□□□□□ -1.43
NBPF3Q9H094 AP004242.1-201ENST00000533701 349 ntBASIC6.13□□□□□ -1.43
NBPF3Q9H094 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC6.13□□□□□ -1.43
NBPF3Q9H094 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC6.13□□□□□ -1.43
NBPF3Q9H094 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.13□□□□□ -1.43
NBPF3Q9H094 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC6.13□□□□□ -1.43
NBPF3Q9H094 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC6.13□□□□□ -1.43
NBPF3Q9H094 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.13□□□□□ -1.43
NBPF3Q9H094 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NBPF3Q9H094 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NBPF3Q9H094 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NBPF3Q9H094 AC000374.1-201ENST00000434698 1745 ntBASIC6.13□□□□□ -1.43
NBPF3Q9H094 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
NBPF3Q9H094 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
NBPF3Q9H094 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
NBPF3Q9H094 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NBPF3Q9H094 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.12□□□□□ -1.43
NBPF3Q9H094 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.12□□□□□ -1.43
NBPF3Q9H094 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.12□□□□□ -1.43
NBPF3Q9H094 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NBPF3Q9H094 RNU6-879P-201ENST00000364328 108 ntBASIC6.12□□□□□ -1.43
NBPF3Q9H094 SNORA62-201ENST00000365493 153 ntBASIC6.12□□□□□ -1.43
NBPF3Q9H094 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC6.12□□□□□ -1.43
NBPF3Q9H094 Y_RNA.420-201ENST00000384043 110 ntBASIC6.12□□□□□ -1.43
NBPF3Q9H094 RNU6-211P-201ENST00000384047 107 ntBASIC6.12□□□□□ -1.43
NBPF3Q9H094 Y_RNA.563-201ENST00000384707 108 ntBASIC6.12□□□□□ -1.43
NBPF3Q9H094 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.12□□□□□ -1.43
NBPF3Q9H094 SNORA48.4-201ENST00000391089 134 ntBASIC6.12□□□□□ -1.43
NBPF3Q9H094 RPS4XP3-201ENST00000398541 413 ntBASIC6.12□□□□□ -1.43
NBPF3Q9H094 AL022722.2-201ENST00000402519 180 ntBASIC6.12□□□□□ -1.43
NBPF3Q9H094 RPL7AP73-201ENST00000413490 353 ntBASIC6.12□□□□□ -1.43
NBPF3Q9H094 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC6.12□□□□□ -1.43
NBPF3Q9H094 AC011742.1-201ENST00000431448 434 ntBASIC6.12□□□□□ -1.43
NBPF3Q9H094 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC6.12□□□□□ -1.43
NBPF3Q9H094 RPS29P10-201ENST00000439197 166 ntBASIC6.12□□□□□ -1.43
NBPF3Q9H094 RPL34P20-201ENST00000442771 351 ntBASIC6.12□□□□□ -1.43
NBPF3Q9H094 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
NBPF3Q9H094 snoU13.20-201ENST00000459180 104 ntBASIC6.12□□□□□ -1.43
NBPF3Q9H094 RPS29P27-201ENST00000463711 170 ntBASIC6.12□□□□□ -1.43
NBPF3Q9H094 AC020890.1-201ENST00000491837 504 ntBASIC6.12□□□□□ -1.43
NBPF3Q9H094 AC022493.1-201ENST00000492984 337 ntBASIC6.12□□□□□ -1.43
NBPF3Q9H094 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NBPF3Q9H094 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NBPF3Q9H094 MIR4660-201ENST00000583549 74 ntBASIC6.12□□□□□ -1.43
NBPF3Q9H094 RPL23AP88-201ENST00000605759 454 ntBASIC6.12□□□□□ -1.43
NBPF3Q9H094 SNORD91B-202ENST00000608459 222 ntBASIC6.12□□□□□ -1.43
NBPF3Q9H094 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.12□□□□□ -1.43
NBPF3Q9H094 AC091905.4-201ENST00000623432 202 ntBASIC6.12□□□□□ -1.43
NBPF3Q9H094 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.12□□□□□ -1.43
NBPF3Q9H094 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
NBPF3Q9H094 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NBPF3Q9H094 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms