Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 RN7SKP46-201ENST00000515942 234 ntBASIC5.05□□□□□ -1.6
IFT43Q96FT9 RNA5SP43-201ENST00000516559 110 ntBASIC5.05□□□□□ -1.6
IFT43Q96FT9 AC134698.5-201ENST00000519444 336 ntBASIC5.05□□□□□ -1.6
IFT43Q96FT9 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.05□□□□□ -1.6
IFT43Q96FT9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.05□□□□□ -1.6
IFT43Q96FT9 AC084851.1-201ENST00000529105 249 ntBASIC5.05□□□□□ -1.6
IFT43Q96FT9 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
IFT43Q96FT9 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.05□□□□□ -1.6
IFT43Q96FT9 AC087783.2-201ENST00000605070 562 ntBASIC5.05□□□□□ -1.6
IFT43Q96FT9 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
IFT43Q96FT9 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
IFT43Q96FT9 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
IFT43Q96FT9 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.05□□□□□ -1.6
IFT43Q96FT9 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
IFT43Q96FT9 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
IFT43Q96FT9 NCAPGP1-201ENST00000505112 1814 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
IFT43Q96FT9 SALL4P2-201ENST00000423288 2910 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
IFT43Q96FT9 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.04□□□□□ -1.6
IFT43Q96FT9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
IFT43Q96FT9 Y_RNA.150-201ENST00000363562 102 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 RNU6-173P-201ENST00000364215 104 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 RNY1-201ENST00000364228 113 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 RNA5SP428-201ENST00000365129 132 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 Y_RNA.352-201ENST00000365439 102 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 SNORD58.1-201ENST00000391313 66 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 RNU2-14P-201ENST00000411053 191 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.04□□□□□ -1.6
IFT43Q96FT9 OR2AM1P-201ENST00000422137 422 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 AC087650.1-201ENST00000431445 468 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 AL139109.1-201ENST00000455491 297 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 RPL30P10-201ENST00000488148 337 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 RNU4-71P-201ENST00000516258 113 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 IGKV1-32-201ENST00000519290 311 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 AC091144.1-201ENST00000519573 138 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.04□□□□□ -1.6
IFT43Q96FT9 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.04□□□□□ -1.6
IFT43Q96FT9 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.04□□□□□ -1.6
IFT43Q96FT9 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.04□□□□□ -1.6
IFT43Q96FT9 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.04□□□□□ -1.6
IFT43Q96FT9 FAM60BP-201ENST00000578364 658 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 MIR4737-201ENST00000583979 81 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 AC073410.2-201ENST00000603240 332 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 AL731566.2-201ENST00000618971 317 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 AC087385.3-201ENST00000620477 187 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.04□□□□□ -1.6
IFT43Q96FT9 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
IFT43Q96FT9 SDAD1P1-202ENST00000524156 2051 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
IFT43Q96FT9 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
IFT43Q96FT9 LINC01109-201ENST00000603837 3081 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
IFT43Q96FT9 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
IFT43Q96FT9 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 OR4G2P-202ENST00000641004 1759 ntBASIC5.04□□□□□ -1.6
IFT43Q96FT9 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
IFT43Q96FT9 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
IFT43Q96FT9 Z75746.1-201ENST00000440243 2080 ntBASIC5.03□□□□□ -1.6
IFT43Q96FT9 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
IFT43Q96FT9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
IFT43Q96FT9 Y_RNA.297-201ENST00000364950 91 ntBASIC5.03□□□□□ -1.6
IFT43Q96FT9 RNU6-130P-201ENST00000411112 103 ntBASIC5.03□□□□□ -1.6
IFT43Q96FT9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
IFT43Q96FT9 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.03□□□□□ -1.6
IFT43Q96FT9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.03□□□□□ -1.6
IFT43Q96FT9 AL138752.1-201ENST00000452964 351 ntBASIC5.03□□□□□ -1.6
IFT43Q96FT9 snoU13.20-201ENST00000459180 104 ntBASIC5.03□□□□□ -1.6
IFT43Q96FT9 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.03□□□□□ -1.6
IFT43Q96FT9 AC098869.1-201ENST00000481627 292 ntBASIC5.03□□□□□ -1.6
IFT43Q96FT9 AC073073.1-201ENST00000493920 463 ntBASIC5.03□□□□□ -1.6
IFT43Q96FT9 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.03□□□□□ -1.6
IFT43Q96FT9 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.03□□□□□ -1.6
IFT43Q96FT9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.03□□□□□ -1.6
IFT43Q96FT9 IGKV2-23-201ENST00000518729 323 ntBASIC5.03□□□□□ -1.6
IFT43Q96FT9 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.03□□□□□ -1.6
IFT43Q96FT9 AC010900.2-201ENST00000604508 210 ntBASIC5.03□□□□□ -1.6
IFT43Q96FT9 AC091979.2-201ENST00000607514 214 ntBASIC5.03□□□□□ -1.6
IFT43Q96FT9 uc_338.18-201ENST00000615451 175 ntBASIC5.03□□□□□ -1.6
IFT43Q96FT9 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.03□□□□□ -1.6
IFT43Q96FT9 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
IFT43Q96FT9 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.03□□□□□ -1.6
IFT43Q96FT9 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
IFT43Q96FT9 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
IFT43Q96FT9 AP000560.1-201ENST00000624150 1937 ntBASIC5.03□□□□□ -1.6
IFT43Q96FT9 MAPK10-263ENST00000641052 4307 ntBASIC5.03□□□□□ -1.6
IFT43Q96FT9 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
IFT43Q96FT9 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.61
IFT43Q96FT9 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
IFT43Q96FT9 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.02□□□□□ -1.61
IFT43Q96FT9 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
IFT43Q96FT9 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
IFT43Q96FT9 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
IFT43Q96FT9 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.02□□□□□ -1.61
IFT43Q96FT9 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
IFT43Q96FT9 RNU1-94P-201ENST00000362627 173 ntBASIC5.02□□□□□ -1.61
IFT43Q96FT9 Y_RNA.237-201ENST00000364439 102 ntBASIC5.02□□□□□ -1.61
IFT43Q96FT9 RN7SKP227-201ENST00000364445 330 ntBASIC5.02□□□□□ -1.61
IFT43Q96FT9 RNU6-708P-201ENST00000384217 107 ntBASIC5.02□□□□□ -1.61
IFT43Q96FT9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms