Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 TRBV1-201ENST00000476502 284 ntBASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 HSPE1P6-201ENST00000479457 291 ntBASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 AC108860.1-201ENST00000484521 383 ntBASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 AC026784.1-201ENST00000507986 352 ntBASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 BNIP3P25-201ENST00000596023 559 ntBASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 AL138889.2-201ENST00000603883 242 ntBASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 U7.8-201ENST00000619968 63 ntBASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 AC068724.3-201ENST00000625906 87 ntBASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 AC119674.1-207ENST00000641355 633 ntBASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 AC007390.2-201ENST00000606229 3803 ntBASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 AC008725.1-201ENST00000605123 2263 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 AC006026.1-201ENST00000444025 1803 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 AC121333.1-201ENST00000567488 2709 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 RNU5A-1-201ENST00000362698 116 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 Y_RNA.167-201ENST00000363735 109 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 Y_RNA.184-201ENST00000363884 108 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 RNA5SP479-201ENST00000364858 117 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 RNU6-1127P-201ENST00000384580 107 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 RNU6-1011P-201ENST00000384668 107 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 U3.39-201ENST00000408569 239 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 RNU6-628P-201ENST00000410675 107 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 USP9YP20-201ENST00000419224 558 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 AL451054.2-201ENST00000420896 202 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 PRPS1P1-201ENST00000445305 876 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 AC104058.1-201ENST00000448028 297 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 snoU13.24-201ENST00000458998 104 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 RNU6-953P-201ENST00000459154 107 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 RNU7-66P-201ENST00000459469 62 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 AC020593.1-201ENST00000507399 299 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 Y_RNA.689-201ENST00000516589 107 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 IGKV2D-23-201ENST00000518179 286 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 AL355836.1-201ENST00000555951 870 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 MIR5187-201ENST00000583479 76 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 AL670379.4-201ENST00000605279 254 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 AL158032.1-201ENST00000605401 106 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 AL022345.1-201ENST00000607292 135 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 AC022149.2-201ENST00000621061 203 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 MTND5P42-201ENST00000637720 498 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 TNPO1P3-201ENST00000436471 2662 ntBASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.7□□□□□ -1.82
ATG4AQ8WYN0 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 Y_RNA.414-201ENST00000384011 101 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 MIR1193-201ENST00000408109 78 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 MIR1183-201ENST00000408856 89 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 RN7SKP156-201ENST00000410308 342 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 AC092809.3-201ENST00000415453 231 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 AC017079.2-201ENST00000416102 485 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 RPL17P36-201ENST00000420302 549 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 HMGB1P18-201ENST00000438801 619 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 RPS15AP27-201ENST00000449183 343 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 PPP1R2P5-201ENST00000457256 603 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 SCARNA18-201ENST00000459004 134 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms