Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.54□□□□□ -2
BEST4Q8NFU0 Y_RNA.689-201ENST00000516589 107 ntBASIC2.54□□□□□ -2
BEST4Q8NFU0 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.54□□□□□ -2
BEST4Q8NFU0 AC100870.1-201ENST00000522035 505 ntBASIC2.54□□□□□ -2
BEST4Q8NFU0 ATP5F1P5-201ENST00000526403 760 ntBASIC2.54□□□□□ -2
BEST4Q8NFU0 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.54□□□□□ -2
BEST4Q8NFU0 AC107016.2-201ENST00000547968 190 ntBASIC2.54□□□□□ -2
BEST4Q8NFU0 AC011611.1-201ENST00000552179 197 ntBASIC2.54□□□□□ -2
BEST4Q8NFU0 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.54□□□□□ -2
BEST4Q8NFU0 TRAV28-201ENST00000557548 323 ntBASIC2.54□□□□□ -2
BEST4Q8NFU0 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.54□□□□□ -2
BEST4Q8NFU0 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.54□□□□□ -2
BEST4Q8NFU0 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.54□□□□□ -2
BEST4Q8NFU0 AC004805.2-201ENST00000605382 482 ntBASIC2.54□□□□□ -2
BEST4Q8NFU0 AP002360.4-201ENST00000606980 481 ntBASIC2.54□□□□□ -2
BEST4Q8NFU0 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.54□□□□□ -2
BEST4Q8NFU0 Z99129.1-201ENST00000612510 255 ntBASIC2.54□□□□□ -2
BEST4Q8NFU0 MIR6076-201ENST00000617521 113 ntBASIC2.54□□□□□ -2
BEST4Q8NFU0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.54□□□□□ -2
BEST4Q8NFU0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
BEST4Q8NFU0 FARSBP1-201ENST00000435808 1778 ntBASIC2.54□□□□□ -2
BEST4Q8NFU0 CR848007.1-201ENST00000442354 1699 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.53□□□□□ -2
BEST4Q8NFU0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.53□□□□□ -2
BEST4Q8NFU0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.53□□□□□ -2
BEST4Q8NFU0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.53□□□□□ -2
BEST4Q8NFU0 AL049641.1-201ENST00000441055 1948 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 RNU6-181P-201ENST00000363225 107 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 Y_RNA.194-201ENST00000363985 102 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 CD24P4-201ENST00000382840 243 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 RNU6-456P-201ENST00000384493 107 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 RNU6-140P-201ENST00000384566 108 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 MIR1290-201ENST00000408735 78 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 SNRPEP4-201ENST00000435815 279 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 AC093156.1-201ENST00000440382 670 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.53□□□□□ -2
BEST4Q8NFU0 AC008155.2-201ENST00000464337 397 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 RPS29P2-201ENST00000479278 136 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 RN7SL432P-201ENST00000484057 298 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.53□□□□□ -2
BEST4Q8NFU0 RNU7-51P-201ENST00000516560 62 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 RNU6-445P-201ENST00000516949 107 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 AC026403.1-201ENST00000518938 295 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 AC090572.1-201ENST00000519251 160 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 AP002963.1-201ENST00000530590 184 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 AC022880.1-201ENST00000534017 973 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.53□□□□□ -2
BEST4Q8NFU0 AC007458.1-201ENST00000542812 373 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 AC004486.1-201ENST00000546846 233 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.53□□□□□ -2
BEST4Q8NFU0 AC087883.1-201ENST00000551882 391 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.53□□□□□ -2
BEST4Q8NFU0 AC009063.1-201ENST00000563342 702 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 AC073648.5-201ENST00000603502 305 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 AC136601.2-201ENST00000604356 474 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 AL161798.1-201ENST00000604630 131 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 MIR6748-201ENST00000610433 71 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.53□□□□□ -2
BEST4Q8NFU0 AC007318.2-201ENST00000620999 243 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 AC073308.1-201ENST00000623696 305 ntBASIC2.53□□□□□ -2
BEST4Q8NFU0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
BEST4Q8NFU0 AL161912.2-201ENST00000565707 3007 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 AC073325.2-201ENST00000339545 159 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 Y_RNA.41-201ENST00000362646 102 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 RNU6-884P-201ENST00000363889 107 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 RNY1P12-201ENST00000364251 105 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 Y_RNA.245-201ENST00000364493 95 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 RNU4-24P-201ENST00000364565 139 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 RNA5SP515-201ENST00000364570 118 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 SNORA7.4-201ENST00000384249 137 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 SNORA24.1-201ENST00000384401 135 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 RNU2-33P-201ENST00000410344 192 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 RNU2-66P-201ENST00000410650 161 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 AL590383.1-201ENST00000428602 75 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 Z82210.1-201ENST00000440037 231 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 RPL23AP20-201ENST00000447965 421 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 AL133547.1-201ENST00000448546 220 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 SNRPFP4-201ENST00000456366 242 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 RN7SL863P-201ENST00000462370 296 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 AL358832.1-201ENST00000497800 389 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 RNU6-123P-201ENST00000516163 102 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 RNU2-10P-201ENST00000516375 211 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 RNA5SP165-201ENST00000517142 115 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 MTCYBP20-201ENST00000524239 1129 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms