Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC073465.2-201ENST00000440938 498 ntBASIC5.16□□□□□ -1.58
SIX5Q8N196 LINC02210-201ENST00000444561 288 ntBASIC5.16□□□□□ -1.58
SIX5Q8N196 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC5.16□□□□□ -1.58
SIX5Q8N196 AL513124.1-201ENST00000450410 614 ntBASIC5.16□□□□□ -1.58
SIX5Q8N196 NUTF2P7-201ENST00000453086 375 ntBASIC5.16□□□□□ -1.58
SIX5Q8N196 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.16□□□□□ -1.58
SIX5Q8N196 RNU7-87P-201ENST00000459343 62 ntBASIC5.16□□□□□ -1.58
SIX5Q8N196 RN7SL41P-201ENST00000476144 297 ntBASIC5.16□□□□□ -1.58
SIX5Q8N196 RNU6-138P-201ENST00000515952 107 ntBASIC5.16□□□□□ -1.58
SIX5Q8N196 RNU6-377P-201ENST00000515965 102 ntBASIC5.16□□□□□ -1.58
SIX5Q8N196 RN7SKP21-201ENST00000516503 220 ntBASIC5.16□□□□□ -1.58
SIX5Q8N196 Y_RNA.713-201ENST00000517013 96 ntBASIC5.16□□□□□ -1.58
SIX5Q8N196 RNU6-111P-201ENST00000517179 105 ntBASIC5.16□□□□□ -1.58
SIX5Q8N196 AC027369.5-201ENST00000533838 755 ntBASIC5.16□□□□□ -1.58
SIX5Q8N196 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.16□□□□□ -1.58
SIX5Q8N196 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.16□□□□□ -1.58
SIX5Q8N196 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.16□□□□□ -1.58
SIX5Q8N196 SNRPGP15-201ENST00000600149 222 ntBASIC5.16□□□□□ -1.58
SIX5Q8N196 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SIX5Q8N196 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.16□□□□□ -1.58
SIX5Q8N196 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SIX5Q8N196 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SIX5Q8N196 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.16□□□□□ -1.58
SIX5Q8N196 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.16□□□□□ -1.58
SIX5Q8N196 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.16□□□□□ -1.58
SIX5Q8N196 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SIX5Q8N196 AC139713.2-214ENST00000642059 1811 ntBASIC5.16□□□□□ -1.58
SIX5Q8N196 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
SIX5Q8N196 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SIX5Q8N196 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
SIX5Q8N196 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.15□□□□□ -1.58
SIX5Q8N196 AP001642.1-201ENST00000624727 2117 ntBASIC5.15□□□□□ -1.58
SIX5Q8N196 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.15□□□□□ -1.58
SIX5Q8N196 AP000560.1-201ENST00000624150 1937 ntBASIC5.15□□□□□ -1.58
SIX5Q8N196 AC006206.1-201ENST00000544842 3387 ntBASIC5.15□□□□□ -1.58
SIX5Q8N196 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SIX5Q8N196 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
SIX5Q8N196 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SIX5Q8N196 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.15□□□□□ -1.58
SIX5Q8N196 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.15□□□□□ -1.58
SIX5Q8N196 AC015813.6-201ENST00000624409 5808 ntBASIC5.15□□□□□ -1.58
SIX5Q8N196 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
SIX5Q8N196 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.15□□□□□ -1.58
SIX5Q8N196 U3.6-201ENST00000363622 211 ntBASIC5.15□□□□□ -1.59
SIX5Q8N196 RNU5E-7P-201ENST00000365290 117 ntBASIC5.15□□□□□ -1.59
SIX5Q8N196 MIR190B-201ENST00000401119 79 ntBASIC5.15□□□□□ -1.59
SIX5Q8N196 RN7SKP106-201ENST00000410832 272 ntBASIC5.15□□□□□ -1.59
SIX5Q8N196 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.15□□□□□ -1.59
SIX5Q8N196 NDUFB4P7-201ENST00000423198 363 ntBASIC5.15□□□□□ -1.59
SIX5Q8N196 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.15□□□□□ -1.59
SIX5Q8N196 RN7SL443P-201ENST00000464331 290 ntBASIC5.15□□□□□ -1.59
SIX5Q8N196 AC091912.1-201ENST00000511351 248 ntBASIC5.15□□□□□ -1.59
SIX5Q8N196 AC026402.1-201ENST00000513642 170 ntBASIC5.15□□□□□ -1.59
SIX5Q8N196 Y_RNA.706-201ENST00000516933 99 ntBASIC5.15□□□□□ -1.59
SIX5Q8N196 RNU6-182P-201ENST00000516970 105 ntBASIC5.15□□□□□ -1.59
SIX5Q8N196 RN7SKP40-201ENST00000517211 242 ntBASIC5.15□□□□□ -1.59
SIX5Q8N196 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.15□□□□□ -1.59
SIX5Q8N196 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SIX5Q8N196 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.15□□□□□ -1.59
SIX5Q8N196 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.15□□□□□ -1.59
SIX5Q8N196 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.15□□□□□ -1.59
SIX5Q8N196 AC053481.4-201ENST00000583164 216 ntBASIC5.15□□□□□ -1.59
SIX5Q8N196 RNF138P2-201ENST00000603490 592 ntBASIC5.15□□□□□ -1.59
SIX5Q8N196 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SIX5Q8N196 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SIX5Q8N196 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.14□□□□□ -1.59
SIX5Q8N196 AP001148.1-201ENST00000624124 2359 ntBASIC5.14□□□□□ -1.59
SIX5Q8N196 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SIX5Q8N196 MUC2-202ENST00000613187 4845 ntBASIC5.14□□□□□ -1.59
SIX5Q8N196 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.14□□□□□ -1.59
SIX5Q8N196 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SIX5Q8N196 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.14□□□□□ -1.59
SIX5Q8N196 RNU6-227P-201ENST00000362865 103 ntBASIC5.14□□□□□ -1.59
SIX5Q8N196 Y_RNA.105-201ENST00000363182 111 ntBASIC5.14□□□□□ -1.59
SIX5Q8N196 SNORA40C-201ENST00000391285 128 ntBASIC5.14□□□□□ -1.59
SIX5Q8N196 RNU2-33P-201ENST00000410344 192 ntBASIC5.14□□□□□ -1.59
SIX5Q8N196 RNU6-130P-201ENST00000411112 103 ntBASIC5.14□□□□□ -1.59
SIX5Q8N196 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.14□□□□□ -1.59
SIX5Q8N196 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.14□□□□□ -1.59
SIX5Q8N196 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.14□□□□□ -1.59
SIX5Q8N196 MTCO3P29-201ENST00000432119 779 ntBASIC5.14□□□□□ -1.59
SIX5Q8N196 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.14□□□□□ -1.59
SIX5Q8N196 PIGFP3-201ENST00000441918 722 ntBASIC5.14□□□□□ -1.59
SIX5Q8N196 AL078601.1-201ENST00000444542 271 ntBASIC5.14□□□□□ -1.59
SIX5Q8N196 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.14□□□□□ -1.59
SIX5Q8N196 ANP32BP2-201ENST00000454525 545 ntBASIC5.14□□□□□ -1.59
SIX5Q8N196 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SIX5Q8N196 AC022133.1-201ENST00000490961 571 ntBASIC5.14□□□□□ -1.59
SIX5Q8N196 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.14□□□□□ -1.59
SIX5Q8N196 RNU6-572P-201ENST00000516724 80 ntBASIC5.14□□□□□ -1.59
SIX5Q8N196 IGKV2-23-201ENST00000518729 323 ntBASIC5.14□□□□□ -1.59
SIX5Q8N196 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.14□□□□□ -1.59
SIX5Q8N196 AC010186.2-204ENST00000537668 439 ntBASIC5.14□□□□□ -1.59
SIX5Q8N196 AC093023.1-201ENST00000547375 507 ntBASIC5.14□□□□□ -1.59
SIX5Q8N196 RRN3P3-201ENST00000549207 578 ntBASIC5.14□□□□□ -1.59
SIX5Q8N196 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.14□□□□□ -1.59
SIX5Q8N196 RN7SL690P-201ENST00000582087 240 ntBASIC5.14□□□□□ -1.59
SIX5Q8N196 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.14□□□□□ -1.59
SIX5Q8N196 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.14□□□□□ -1.59
SIX5Q8N196 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms