Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 AC023043.4-201ENST00000612081 449 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 RNA5SP440-201ENST00000612665 119 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 Y_RNA.778-201ENST00000620203 90 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 RNU6-151P-201ENST00000364158 107 ntBASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 Y_RNA.245-201ENST00000364493 95 ntBASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 RNU6-818P-201ENST00000364837 108 ntBASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 Y_RNA.357-201ENST00000365487 109 ntBASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 RNU6-211P-201ENST00000384047 107 ntBASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 RNU6-541P-201ENST00000384709 110 ntBASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 WARS2P1-201ENST00000429678 537 ntBASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 GSTM5P1-201ENST00000434751 660 ntBASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 SEPT7P4-201ENST00000437076 306 ntBASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 AC124916.1-201ENST00000444020 547 ntBASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 AF186996.7-201ENST00000492781 209 ntBASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 IGKV3D-34-201ENST00000522638 302 ntBASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 AC024940.3-201ENST00000538551 316 ntBASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 AL121603.1-201ENST00000553815 142 ntBASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 AL390726.5-202ENST00000564800 256 ntBASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 MIR3684-201ENST00000579779 74 ntBASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
CCDC116Q8IYX3 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.09□□□□□ -1.6
CCDC116Q8IYX3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
CCDC116Q8IYX3 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC116Q8IYX3 AC023421.1-201ENST00000590535 1785 ntBASIC5.09□□□□□ -1.6
CCDC116Q8IYX3 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC116Q8IYX3 AL109809.4-201ENST00000603520 2185 ntBASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 ADAM24P-201ENST00000398655 2101 ntBASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 Y_RNA.7-201ENST00000362352 102 ntBASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 Y_RNA.23-201ENST00000362496 106 ntBASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 RNU6-105P-201ENST00000363909 104 ntBASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 RN7SKP124-201ENST00000364730 341 ntBASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 Y_RNA.412-201ENST00000384001 104 ntBASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 RNU6-1001P-201ENST00000411265 100 ntBASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 GPS2P1-201ENST00000411761 986 ntBASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 SRSF1P1-201ENST00000424058 520 ntBASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 AC092798.1-201ENST00000458542 409 ntBASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 AC022795.1-201ENST00000473808 480 ntBASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 RN7SL273P-201ENST00000481561 299 ntBASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 RPS27P26-201ENST00000494583 239 ntBASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 AC005840.1-201ENST00000498412 377 ntBASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 RNU6-572P-201ENST00000516724 80 ntBASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 AP004607.2-201ENST00000533949 322 ntBASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 MIR5695-201ENST00000579717 85 ntBASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 AC000068.2-201ENST00000608816 460 ntBASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 AC244107.2-201ENST00000611773 76 ntBASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 AC007390.2-201ENST00000606229 3803 ntBASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CCDC116Q8IYX3 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms