Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AL035413.2-201ENST00000604801 525 ntBASIC3.61□□□□□ -1.83
RFX6Q8HWS3 AC015967.1-201ENST00000619893 476 ntBASIC3.61□□□□□ -1.83
RFX6Q8HWS3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.61□□□□□ -1.83
RFX6Q8HWS3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.61□□□□□ -1.83
RFX6Q8HWS3 AC006504.8-201ENST00000621046 635 ntBASIC3.61□□□□□ -1.83
RFX6Q8HWS3 AC010338.1-201ENST00000621823 717 ntBASIC3.61□□□□□ -1.83
RFX6Q8HWS3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
RFX6Q8HWS3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RFX6Q8HWS3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.61□□□□□ -1.83
RFX6Q8HWS3 AL353746.1-201ENST00000566293 6881 ntBASIC3.61□□□□□ -1.83
RFX6Q8HWS3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
RFX6Q8HWS3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RFX6Q8HWS3 TAB3P1-202ENST00000452645 1634 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.6□□□□□ -1.83
RFX6Q8HWS3 RPL7P26-201ENST00000333817 754 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 MIR30E-201ENST00000362104 92 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 RNU6-188P-201ENST00000364207 107 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RFX6Q8HWS3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RFX6Q8HWS3 RNA5SP129-201ENST00000410276 118 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.6□□□□□ -1.83
RFX6Q8HWS3 AL513185.2-201ENST00000425543 193 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.6□□□□□ -1.83
RFX6Q8HWS3 AL359073.1-201ENST00000448036 403 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 MTND1P18-201ENST00000448191 573 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.6□□□□□ -1.83
RFX6Q8HWS3 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 RPS29P15-201ENST00000458329 171 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 SNORD105B-201ENST00000458770 79 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 RPS20P20-201ENST00000460498 340 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.6□□□□□ -1.83
RFX6Q8HWS3 AC104619.4-201ENST00000510773 249 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 RNU6-1153P-201ENST00000516760 105 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 RNA5SP503-201ENST00000517047 117 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 SNORA31.20-201ENST00000517111 133 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 RNU6-840P-201ENST00000517275 65 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.6□□□□□ -1.83
RFX6Q8HWS3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.6□□□□□ -1.83
RFX6Q8HWS3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.6□□□□□ -1.83
RFX6Q8HWS3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.6□□□□□ -1.83
RFX6Q8HWS3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.6□□□□□ -1.83
RFX6Q8HWS3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.6□□□□□ -1.83
RFX6Q8HWS3 AC012182.1-201ENST00000570133 895 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.6□□□□□ -1.83
RFX6Q8HWS3 MIR4775-201ENST00000581168 75 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 AP001029.3-201ENST00000588063 596 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 AL121772.2-201ENST00000614331 297 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 U6.114-201ENST00000636407 96 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.6□□□□□ -1.83
RFX6Q8HWS3 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.6□□□□□ -1.83
RFX6Q8HWS3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.6□□□□□ -1.83
RFX6Q8HWS3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RFX6Q8HWS3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RFX6Q8HWS3 MFSD8-233ENST00000641482 4860 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RFX6Q8HWS3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.6□□□□□ -1.83
RFX6Q8HWS3 RIOK3P1-201ENST00000418778 1528 ntBASIC3.6□□□□□ -1.83
RFX6Q8HWS3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RFX6Q8HWS3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RFX6Q8HWS3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RFX6Q8HWS3 Y_RNA.157-201ENST00000363638 102 ntBASIC3.59□□□□□ -1.83
RFX6Q8HWS3 RNU6-76P-201ENST00000384060 104 ntBASIC3.59□□□□□ -1.83
RFX6Q8HWS3 MIR23A-201ENST00000385245 73 ntBASIC3.59□□□□□ -1.83
RFX6Q8HWS3 MT-TD-201ENST00000387419 68 ntBASIC3.59□□□□□ -1.83
RFX6Q8HWS3 SNORD37.1-201ENST00000390968 65 ntBASIC3.59□□□□□ -1.83
RFX6Q8HWS3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.59□□□□□ -1.83
RFX6Q8HWS3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.59□□□□□ -1.83
RFX6Q8HWS3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.59□□□□□ -1.83
RFX6Q8HWS3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.59□□□□□ -1.83
RFX6Q8HWS3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.59□□□□□ -1.83
RFX6Q8HWS3 MTCYBP8-201ENST00000422855 651 ntBASIC3.59□□□□□ -1.83
RFX6Q8HWS3 GAPDHP27-201ENST00000447427 1020 ntBASIC3.59□□□□□ -1.83
RFX6Q8HWS3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.59□□□□□ -1.83
RFX6Q8HWS3 AC010285.1-201ENST00000470580 392 ntBASIC3.59□□□□□ -1.83
RFX6Q8HWS3 AC012181.1-201ENST00000479895 423 ntBASIC3.59□□□□□ -1.83
RFX6Q8HWS3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.59□□□□□ -1.83
RFX6Q8HWS3 VN1R104P-201ENST00000505115 1009 ntBASIC3.59□□□□□ -1.83
RFX6Q8HWS3 HMGB1P22-201ENST00000505315 124 ntBASIC3.59□□□□□ -1.83
RFX6Q8HWS3 KLHL2P1-201ENST00000508691 521 ntBASIC3.59□□□□□ -1.83
RFX6Q8HWS3 AC114786.4-201ENST00000508771 728 ntBASIC3.59□□□□□ -1.83
RFX6Q8HWS3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.59□□□□□ -1.83
RFX6Q8HWS3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.59□□□□□ -1.83
RFX6Q8HWS3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.59□□□□□ -1.83
RFX6Q8HWS3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
RFX6Q8HWS3 AC103843.2-201ENST00000530523 682 ntBASIC3.59□□□□□ -1.83
RFX6Q8HWS3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.59□□□□□ -1.83
RFX6Q8HWS3 OR4H12P-201ENST00000556269 907 ntBASIC3.59□□□□□ -1.83
RFX6Q8HWS3 AC074050.1-201ENST00000563247 211 ntBASIC3.59□□□□□ -1.83
RFX6Q8HWS3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.59□□□□□ -1.83
RFX6Q8HWS3 AC009233.1-201ENST00000616477 371 ntBASIC3.59□□□□□ -1.83
RFX6Q8HWS3 uc_338.11-201ENST00000619132 160 ntBASIC3.59□□□□□ -1.83
RFX6Q8HWS3 U7.8-201ENST00000619968 63 ntBASIC3.59□□□□□ -1.83
RFX6Q8HWS3 AC025034.2-201ENST00000623264 286 ntBASIC3.59□□□□□ -1.83
RFX6Q8HWS3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.59□□□□□ -1.83
RFX6Q8HWS3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RFX6Q8HWS3 AC004972.1-201ENST00000623934 2209 ntBASIC3.59□□□□□ -1.84
RFX6Q8HWS3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.84
RFX6Q8HWS3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
RFX6Q8HWS3 AL137003.2-201ENST00000606924 2538 ntBASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms