Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC013553.2-201ENST00000604244 589 ntBASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 TUG1_1.1-201ENST00000610654 145 ntBASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 AL121757.2-201ENST00000611223 313 ntBASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 AC010133.1-201ENST00000615809 842 ntBASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 MIR8057-201ENST00000620957 69 ntBASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 MTND5P3-201ENST00000438536 1800 ntBASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 NACAP2-201ENST00000318548 624 ntBASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 AC073343.1-201ENST00000328239 651 ntBASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 Y_RNA.535-201ENST00000384612 99 ntBASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 RNU2-36P-201ENST00000410361 191 ntBASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 AC002075.2-201ENST00000425207 252 ntBASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 CKS1BP5-201ENST00000434172 273 ntBASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 CYCSP32-201ENST00000440548 321 ntBASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 AC008264.1-201ENST00000447612 367 ntBASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 RPS4XP2-201ENST00000458402 793 ntBASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 RNU7-182P-201ENST00000459009 62 ntBASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 SNORD97-201ENST00000459187 142 ntBASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 RNU6-1095P-201ENST00000516148 108 ntBASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 MIR4644-201ENST00000579929 84 ntBASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 AP001029.3-201ENST00000588063 596 ntBASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 AC008725.1-201ENST00000605123 2263 ntBASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.16□□□□□ -1.74
UBE3BQ7Z3V4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
UBE3BQ7Z3V4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 RNU1-70P-201ENST00000362618 164 ntBASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-1155P-201ENST00000363554 107 ntBASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-1284P-201ENST00000363701 100 ntBASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-960P-201ENST00000364056 120 ntBASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 SNORD81.2-201ENST00000365153 76 ntBASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 Y_RNA.529-201ENST00000384586 119 ntBASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 MIR514A2-201ENST00000385131 88 ntBASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 MIR514A3-201ENST00000385132 88 ntBASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-332P-201ENST00000391193 108 ntBASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 AL162578.1-201ENST00000406202 378 ntBASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 RNU4-65P-201ENST00000410473 140 ntBASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 AC126124.2-201ENST00000413542 321 ntBASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 MTCYBP8-201ENST00000422855 651 ntBASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 MTND1P14-201ENST00000427400 950 ntBASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 HMGN2P21-201ENST00000447764 270 ntBASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 RPS27AP1-201ENST00000475545 471 ntBASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-1231P-201ENST00000517185 103 ntBASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 AC023050.3-201ENST00000541142 333 ntBASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 RPS3AP23-202ENST00000574601 686 ntBASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 VN1R80P-201ENST00000597126 338 ntBASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 AC012669.1-201ENST00000603209 283 ntBASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 U73479.1-201ENST00000618062 168 ntBASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 AC112487.2-201ENST00000637950 304 ntBASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
UBE3BQ7Z3V4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 RNA5SP374-201ENST00000362939 125 ntBASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-641P-201ENST00000384006 107 ntBASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 MIR135A2-201ENST00000384854 100 ntBASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-903P-201ENST00000391270 109 ntBASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 RNU4-78P-201ENST00000410940 126 ntBASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 AC007390.1-201ENST00000415722 356 ntBASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 AL137014.1-201ENST00000420490 1226 ntBASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 HMGN2P26-201ENST00000463169 339 ntBASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 RPS15AP36-201ENST00000492022 382 ntBASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 PSMA2P1-201ENST00000526365 646 ntBASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 BNIP3P6-201ENST00000549284 499 ntBASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 AC006270.2-201ENST00000578523 652 ntBASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 AC024619.4-201ENST00000580924 316 ntBASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 AC012443.1-201ENST00000605605 231 ntBASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 uc_338.11-201ENST00000619132 160 ntBASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 AL713922.2-201ENST00000619384 716 ntBASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 FRG1KP-201ENST00000623592 341 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms