Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AL355877.2-201ENST00000603670 358 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AC110994.2-201ENST00000635481 492 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 MTND1P37-201ENST00000636562 264 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3□□□□□ -1.93
NUP54Q7Z3B4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3□□□□□ -1.93
NUP54Q7Z3B4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3□□□□□ -1.93
NUP54Q7Z3B4 SNORD56.2-201ENST00000363242 71 ntBASIC3□□□□□ -1.93
NUP54Q7Z3B4 RPS3AP36-201ENST00000398190 775 ntBASIC3□□□□□ -1.93
NUP54Q7Z3B4 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3□□□□□ -1.93
NUP54Q7Z3B4 AC127391.1-201ENST00000411737 98 ntBASIC3□□□□□ -1.93
NUP54Q7Z3B4 BTF3L4P1-201ENST00000413813 468 ntBASIC3□□□□□ -1.93
NUP54Q7Z3B4 RPL7P37-201ENST00000425095 738 ntBASIC3□□□□□ -1.93
NUP54Q7Z3B4 AC009414.1-201ENST00000427200 443 ntBASIC3□□□□□ -1.93
NUP54Q7Z3B4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3□□□□□ -1.93
NUP54Q7Z3B4 AC005300.1-201ENST00000428401 373 ntBASIC3□□□□□ -1.93
NUP54Q7Z3B4 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3□□□□□ -1.93
NUP54Q7Z3B4 CST9LP2-201ENST00000437612 320 ntBASIC3□□□□□ -1.93
NUP54Q7Z3B4 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3□□□□□ -1.93
NUP54Q7Z3B4 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3□□□□□ -1.93
NUP54Q7Z3B4 ELOCP23-201ENST00000452014 332 ntBASIC3□□□□□ -1.93
NUP54Q7Z3B4 RN7SL442P-201ENST00000473804 320 ntBASIC3□□□□□ -1.93
NUP54Q7Z3B4 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3□□□□□ -1.93
NUP54Q7Z3B4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3□□□□□ -1.93
NUP54Q7Z3B4 SNORA31.3-201ENST00000516029 96 ntBASIC3□□□□□ -1.93
NUP54Q7Z3B4 RNU7-51P-201ENST00000516560 62 ntBASIC3□□□□□ -1.93
NUP54Q7Z3B4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3□□□□□ -1.93
NUP54Q7Z3B4 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3□□□□□ -1.93
NUP54Q7Z3B4 AL391261.3-201ENST00000557194 520 ntBASIC3□□□□□ -1.93
NUP54Q7Z3B4 MIR4528-201ENST00000577763 90 ntBASIC3□□□□□ -1.93
NUP54Q7Z3B4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3□□□□□ -1.93
NUP54Q7Z3B4 AL133173.2-201ENST00000614270 90 ntBASIC3□□□□□ -1.93
NUP54Q7Z3B4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3□□□□□ -1.93
NUP54Q7Z3B4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NUP54Q7Z3B4 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3□□□□□ -1.93
NUP54Q7Z3B4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 RNU1-70P-201ENST00000362618 164 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 RNY1P12-201ENST00000364251 105 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 SNORA20.2-201ENST00000383922 131 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 RNU6-140P-201ENST00000384566 108 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 MIR888-201ENST00000401186 77 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 RNA5SP229-201ENST00000410809 99 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 RNU4-47P-201ENST00000410876 114 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 AC007899.1-201ENST00000412776 775 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 MTND3P17-201ENST00000416968 344 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 C1DP2-201ENST00000418167 426 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 ISCA1P6-201ENST00000427740 390 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 OR2AS1P-201ENST00000427827 319 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 HMGB3P12-201ENST00000438745 556 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 AC126182.1-201ENST00000478134 357 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 AL160314.1-201ENST00000490836 438 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 RNA5SP385-201ENST00000515947 110 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 SNORA64.4-201ENST00000516632 81 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 RNU6-1092P-201ENST00000516955 87 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 AC022616.3-201ENST00000523940 148 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 AP006587.4-201ENST00000526053 529 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 AC010546.1-201ENST00000569391 485 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 MIR3167-201ENST00000579623 85 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 AC015871.2-201ENST00000603605 948 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 DPPA3P3-201ENST00000603842 430 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 AC007179.3-201ENST00000604976 235 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 AC008498.1-201ENST00000613012 531 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 AC100793.4-201ENST00000613683 429 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 AC034102.8-201ENST00000615146 484 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 AC138932.5-201ENST00000617759 563 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 AC072046.2-201ENST00000618366 268 ntBASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.99□□□□□ -1.93
NUP54Q7Z3B4 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 RNU6-960P-201ENST00000364056 120 ntBASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 RNU6-701P-201ENST00000384059 107 ntBASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 BX682237.1-201ENST00000415016 335 ntBASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms