Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 RPL7P37-201ENST00000425095 738 ntBASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 AC093106.2-201ENST00000428212 385 ntBASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 RPL36AP6-201ENST00000435770 321 ntBASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 RPL21P2-201ENST00000440049 481 ntBASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 AL353691.1-201ENST00000451332 387 ntBASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 AC108145.1-201ENST00000503770 153 ntBASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 AC006499.6-201ENST00000511169 607 ntBASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 FTH1P9-201ENST00000513251 355 ntBASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 RNU2-53P-201ENST00000516257 147 ntBASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 RNU4-77P-201ENST00000516692 156 ntBASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 RNU6-798P-201ENST00000516912 103 ntBASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 RNU6-64P-201ENST00000517119 105 ntBASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 SNORD116.3-201ENST00000517176 78 ntBASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 AC090115.3-201ENST00000553218 849 ntBASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 AC007375.1-201ENST00000554513 578 ntBASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 MIR4472-2-201ENST00000582069 67 ntBASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 AC012603.1-201ENST00000606424 528 ntBASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 AL672167.1-204ENST00000641875 3017 ntBASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.46□□□□□ -1.69
CNKSR3Q6P9H4 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.46□□□□□ -1.69
CNKSR3Q6P9H4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
CNKSR3Q6P9H4 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
CNKSR3Q6P9H4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 RNU6-101P-201ENST00000410323 104 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 SNORA57.3-201ENST00000411095 141 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 AC093578.1-201ENST00000415219 368 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 AC243428.1-201ENST00000421099 264 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 RBMY1KP-201ENST00000423480 476 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 ELOCP18-201ENST00000434209 337 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 DYNLT3P2-201ENST00000442517 295 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 RPL7P49-201ENST00000471402 708 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 RPL23AP65-201ENST00000475608 468 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 AC022493.2-201ENST00000506122 481 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 RBBP4P6-201ENST00000508098 202 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 SCARNA16.2-201ENST00000516520 172 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 RNA5SP384-201ENST00000516615 116 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 RNU4-60P-201ENST00000517239 135 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 AL133271.1-201ENST00000538229 291 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 AL121576.1-201ENST00000556055 276 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 MIR4293-201ENST00000584305 78 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 RN7SL435P-201ENST00000584418 282 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 MIR5684-201ENST00000585074 65 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 AC012443.1-201ENST00000605605 231 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 RNA5SP108-201ENST00000605921 117 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 AL590099.1-201ENST00000615276 138 ntBASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CNKSR3Q6P9H4 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CNKSR3Q6P9H4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CNKSR3Q6P9H4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.45□□□□□ -1.7
CNKSR3Q6P9H4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CNKSR3Q6P9H4 Z82217.1-201ENST00000625157 8149 ntBASIC4.45□□□□□ -1.7
CNKSR3Q6P9H4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.45□□□□□ -1.7
CNKSR3Q6P9H4 Y_RNA.106-201ENST00000363189 100 ntBASIC4.45□□□□□ -1.7
CNKSR3Q6P9H4 U3.15-201ENST00000365398 212 ntBASIC4.45□□□□□ -1.7
CNKSR3Q6P9H4 RN7SKP156-201ENST00000410308 342 ntBASIC4.45□□□□□ -1.7
CNKSR3Q6P9H4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.45□□□□□ -1.7
CNKSR3Q6P9H4 EZH2P1-201ENST00000431167 291 ntBASIC4.45□□□□□ -1.7
CNKSR3Q6P9H4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CNKSR3Q6P9H4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.45□□□□□ -1.7
CNKSR3Q6P9H4 RPL21P8-201ENST00000465083 535 ntBASIC4.45□□□□□ -1.7
CNKSR3Q6P9H4 AC008571.1-201ENST00000467232 300 ntBASIC4.45□□□□□ -1.7
CNKSR3Q6P9H4 AC108078.2-201ENST00000510750 236 ntBASIC4.45□□□□□ -1.7
CNKSR3Q6P9H4 MTND1P19-201ENST00000511780 315 ntBASIC4.45□□□□□ -1.7
CNKSR3Q6P9H4 RNU6-1069P-201ENST00000516612 133 ntBASIC4.45□□□□□ -1.7
CNKSR3Q6P9H4 AC131281.1-201ENST00000522984 164 ntBASIC4.45□□□□□ -1.7
CNKSR3Q6P9H4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.45□□□□□ -1.7
CNKSR3Q6P9H4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.45□□□□□ -1.7
CNKSR3Q6P9H4 AL355297.3-201ENST00000604082 446 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms