Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 MIR548AC-201ENST00000585049 88 ntBASIC4.13□□□□□ -1.75
ATP13A4Q4VNC1 ATP1B3P1-201ENST00000605365 821 ntBASIC4.13□□□□□ -1.75
ATP13A4Q4VNC1 AC103710.3-201ENST00000608157 948 ntBASIC4.13□□□□□ -1.75
ATP13A4Q4VNC1 AL591424.2-201ENST00000617023 128 ntBASIC4.13□□□□□ -1.75
ATP13A4Q4VNC1 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
ATP13A4Q4VNC1 RMST_9.1-201ENST00000619945 193 ntBASIC4.13□□□□□ -1.75
ATP13A4Q4VNC1 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ATP13A4Q4VNC1 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.13□□□□□ -1.75
ATP13A4Q4VNC1 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
ATP13A4Q4VNC1 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ATP13A4Q4VNC1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATP13A4Q4VNC1 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ATP13A4Q4VNC1 AL353746.1-201ENST00000566293 6881 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 Y_RNA.184-201ENST00000363884 108 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 Y_RNA.509-201ENST00000384506 99 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 RPS4XP7-201ENST00000406274 780 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 MIR1251-201ENST00000408552 70 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 RPL21P90-201ENST00000415692 466 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 RPLP0P7-201ENST00000416050 667 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 AC108032.1-201ENST00000416706 207 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 AL356095.1-201ENST00000417217 199 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 GPM6BP2-201ENST00000432046 144 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 HMGB1P18-201ENST00000438801 619 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 AC083863.1-201ENST00000438811 231 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 PIGFP3-201ENST00000441918 722 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 HSFY6P-201ENST00000445573 403 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 GPM6BP1-201ENST00000446387 144 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 FABP5P15-201ENST00000453566 214 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 CEACAMP4-201ENST00000457676 421 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 AC103987.1-201ENST00000473394 348 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 KC877373.1-201ENST00000479066 408 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 AC068587.1-201ENST00000483613 781 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 AP002812.1-201ENST00000495378 474 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 TRBVA-201ENST00000498804 316 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 SNORA19.2-201ENST00000516013 114 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 Y_RNA.675-201ENST00000516389 149 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 TRAV28-201ENST00000557548 323 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 MIR1273C-201ENST00000578669 77 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 MIR3941-201ENST00000582572 103 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 AC093227.2-201ENST00000589357 285 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 AC012119.1-201ENST00000603184 222 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 AC091167.4-201ENST00000605079 184 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 MIR4727-201ENST00000622232 55 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 RLIMP1-201ENST00000339626 1680 ntBASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ATP13A4Q4VNC1 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 UBE3AP2-201ENST00000429033 2259 ntBASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 AC090740.1-201ENST00000623193 2262 ntBASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 AC007785.2-201ENST00000598627 1916 ntBASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 Y_RNA.301-201ENST00000364990 103 ntBASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 MIR578-201ENST00000384828 96 ntBASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 RNU6-1197P-201ENST00000391183 107 ntBASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 RNU4-6P-201ENST00000410804 122 ntBASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 HMGB1P37-201ENST00000439613 609 ntBASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 RANP8-201ENST00000444720 713 ntBASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 SNRPGP3-201ENST00000469405 227 ntBASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 AC069499.1-201ENST00000489433 509 ntBASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 SNORA14.1-201ENST00000516113 141 ntBASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 Y_RNA.691-201ENST00000516611 103 ntBASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 RNA5SP179-201ENST00000517284 121 ntBASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 YPEL5P3-201ENST00000547227 352 ntBASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 MIR4719-201ENST00000585233 84 ntBASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.11□□□□□ -1.75
ATP13A4Q4VNC1 AC104237.2-201ENST00000612456 443 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms