Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL356266.1-201ENST00000623311 483 ntBASIC2.88□□□□□ -1.95
SHROOM1Q2M3G4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.88□□□□□ -1.95
SHROOM1Q2M3G4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 MTND5P6-201ENST00000422338 1798 ntBASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 TAS2R15P-201ENST00000390674 928 ntBASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 RN7SKP266-201ENST00000410232 287 ntBASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 UBE2FP1-201ENST00000416536 447 ntBASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 HIGD1AP2-201ENST00000446367 280 ntBASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 RNU7-125P-201ENST00000458760 62 ntBASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 RPL23AP45-201ENST00000476406 468 ntBASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 RN7SL297P-201ENST00000483161 293 ntBASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 AC034222.1-201ENST00000494052 532 ntBASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 AC135721.1-201ENST00000497954 479 ntBASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 RNU6-840P-201ENST00000517275 65 ntBASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 AC104984.5-201ENST00000586878 94 ntBASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 MIR6130-201ENST00000619419 109 ntBASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 AP000676.3-201ENST00000623299 569 ntBASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 AC019226.1-201ENST00000625666 515 ntBASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SHROOM1Q2M3G4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 PABPC1P9-201ENST00000426076 1612 ntBASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 SNORA23-201ENST00000365128 182 ntBASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 RNU6-769P-201ENST00000384407 104 ntBASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 MIR325-201ENST00000385260 98 ntBASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 RN7SKP223-201ENST00000410582 62 ntBASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 AC008850.1-201ENST00000427546 362 ntBASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 AC008481.1-201ENST00000463278 396 ntBASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 RPS15AP36-201ENST00000492022 382 ntBASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 TTC39CP1-201ENST00000512513 755 ntBASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 RNU6-1256P-201ENST00000516539 103 ntBASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 COX6CP5-201ENST00000527162 228 ntBASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 ISCA1P3-201ENST00000577104 373 ntBASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 MIR4446-201ENST00000578505 67 ntBASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 TPMTP1-201ENST00000592307 737 ntBASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 AC007938.3-201ENST00000604965 623 ntBASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 BCRP9-201ENST00000605312 388 ntBASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 Z99289.3-201ENST00000605586 594 ntBASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 AC103810.6-201ENST00000606708 136 ntBASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.86□□□□□ -1.95
SHROOM1Q2M3G4 RNU6-432P-201ENST00000384196 109 ntBASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 MIR514A1-201ENST00000385133 98 ntBASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 AL512844.2-201ENST00000433990 593 ntBASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 UBE2FP3-201ENST00000436366 524 ntBASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 AC022447.3-201ENST00000506865 495 ntBASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 AC116347.2-201ENST00000514912 523 ntBASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 RNA5SP281-201ENST00000516504 135 ntBASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 AC009163.5-201ENST00000575421 637 ntBASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 AC091965.4-201ENST00000607691 587 ntBASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 AC091304.6-201ENST00000619761 202 ntBASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 AC012150.2-201ENST00000621300 544 ntBASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 AL049641.1-201ENST00000441055 1948 ntBASIC2.85□□□□□ -1.95
SHROOM1Q2M3G4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms