Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.56□□□□□ -1.52
NFX1Q12986 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.56□□□□□ -1.52
NFX1Q12986 AC025755.1-201ENST00000521306 278 ntBASIC5.56□□□□□ -1.52
NFX1Q12986 BNIP3P1-201ENST00000547295 580 ntBASIC5.56□□□□□ -1.52
NFX1Q12986 AC040958.1-201ENST00000561102 201 ntBASIC5.56□□□□□ -1.52
NFX1Q12986 MIR4660-201ENST00000583549 74 ntBASIC5.56□□□□□ -1.52
NFX1Q12986 PRPF19P1-201ENST00000584766 898 ntBASIC5.56□□□□□ -1.52
NFX1Q12986 AC067852.4-201ENST00000590314 478 ntBASIC5.56□□□□□ -1.52
NFX1Q12986 BRDTP1-201ENST00000605735 677 ntBASIC5.56□□□□□ -1.52
NFX1Q12986 SNORD113-5-201ENST00000607261 78 ntBASIC5.56□□□□□ -1.52
NFX1Q12986 AC011603.4-201ENST00000611325 277 ntBASIC5.56□□□□□ -1.52
NFX1Q12986 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NFX1Q12986 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NFX1Q12986 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
NFX1Q12986 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NFX1Q12986 IQCB2P-201ENST00000401788 1633 ntBASIC5.56□□□□□ -1.52
NFX1Q12986 MAPK10-304ENST00000641341 3984 ntBASIC5.55□□□□□ -1.52
NFX1Q12986 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.55□□□□□ -1.52
NFX1Q12986 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.55□□□□□ -1.52
NFX1Q12986 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
NFX1Q12986 RNA5SP87-201ENST00000384155 118 ntBASIC5.55□□□□□ -1.52
NFX1Q12986 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
NFX1Q12986 EIF4A1P3-201ENST00000411521 244 ntBASIC5.55□□□□□ -1.52
NFX1Q12986 AL160275.2-201ENST00000412010 394 ntBASIC5.55□□□□□ -1.52
NFX1Q12986 COX5BP7-201ENST00000414780 274 ntBASIC5.55□□□□□ -1.52
NFX1Q12986 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.55□□□□□ -1.52
NFX1Q12986 BX323845.1-201ENST00000432417 179 ntBASIC5.55□□□□□ -1.52
NFX1Q12986 AC073063.1-201ENST00000434352 607 ntBASIC5.55□□□□□ -1.52
NFX1Q12986 PTMAP3-201ENST00000447474 330 ntBASIC5.55□□□□□ -1.52
NFX1Q12986 RPS29P33-201ENST00000456717 146 ntBASIC5.55□□□□□ -1.52
NFX1Q12986 SNORD97-201ENST00000459187 142 ntBASIC5.55□□□□□ -1.52
NFX1Q12986 HMGN2P13-201ENST00000476476 274 ntBASIC5.55□□□□□ -1.52
NFX1Q12986 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.55□□□□□ -1.52
NFX1Q12986 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.55□□□□□ -1.52
NFX1Q12986 RNU7-121P-201ENST00000516604 62 ntBASIC5.55□□□□□ -1.52
NFX1Q12986 RNU6-762P-201ENST00000517107 102 ntBASIC5.55□□□□□ -1.52
NFX1Q12986 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.55□□□□□ -1.52
NFX1Q12986 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.55□□□□□ -1.52
NFX1Q12986 uc_338.18-201ENST00000615451 175 ntBASIC5.55□□□□□ -1.52
NFX1Q12986 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.55□□□□□ -1.52
NFX1Q12986 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NFX1Q12986 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NFX1Q12986 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.55□□□□□ -1.52
NFX1Q12986 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NFX1Q12986 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.55□□□□□ -1.52
NFX1Q12986 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NFX1Q12986 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NFX1Q12986 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NFX1Q12986 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NFX1Q12986 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.55□□□□□ -1.52
NFX1Q12986 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.55□□□□□ -1.52
NFX1Q12986 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NFX1Q12986 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
NFX1Q12986 AL136360.1-201ENST00000503377 1900 ntBASIC5.54□□□□□ -1.52
NFX1Q12986 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
NFX1Q12986 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NFX1Q12986 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
NFX1Q12986 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
NFX1Q12986 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NFX1Q12986 AC110491.1-201ENST00000562191 2010 ntBASIC5.54□□□□□ -1.52
NFX1Q12986 Y_RNA.75-201ENST00000362927 97 ntBASIC5.54□□□□□ -1.52
NFX1Q12986 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.54□□□□□ -1.52
NFX1Q12986 RNA5SP494-201ENST00000410653 129 ntBASIC5.54□□□□□ -1.52
NFX1Q12986 RNA5SP111-201ENST00000411386 101 ntBASIC5.54□□□□□ -1.52
NFX1Q12986 AC024067.1-201ENST00000426199 223 ntBASIC5.54□□□□□ -1.52
NFX1Q12986 AL354714.3-201ENST00000447284 493 ntBASIC5.54□□□□□ -1.52
NFX1Q12986 RNU7-107P-201ENST00000459121 61 ntBASIC5.54□□□□□ -1.52
NFX1Q12986 RN7SL814P-201ENST00000487715 300 ntBASIC5.54□□□□□ -1.52
NFX1Q12986 AC008897.1-201ENST00000494006 347 ntBASIC5.54□□□□□ -1.52
NFX1Q12986 AC091959.1-201ENST00000495857 238 ntBASIC5.54□□□□□ -1.52
NFX1Q12986 COX7A2P2-201ENST00000505291 250 ntBASIC5.54□□□□□ -1.52
NFX1Q12986 SNORA27.4-201ENST00000516650 95 ntBASIC5.54□□□□□ -1.52
NFX1Q12986 IGKV2D-36-201ENST00000518643 226 ntBASIC5.54□□□□□ -1.52
NFX1Q12986 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.54□□□□□ -1.52
NFX1Q12986 ATP5F1P5-201ENST00000526403 760 ntBASIC5.54□□□□□ -1.52
NFX1Q12986 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.54□□□□□ -1.52
NFX1Q12986 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.54□□□□□ -1.52
NFX1Q12986 MIR4270-201ENST00000581799 70 ntBASIC5.54□□□□□ -1.52
NFX1Q12986 AC004825.2-201ENST00000616634 455 ntBASIC5.54□□□□□ -1.52
NFX1Q12986 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.54□□□□□ -1.52
NFX1Q12986 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NFX1Q12986 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
NFX1Q12986 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.54□□□□□ -1.52
NFX1Q12986 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.54□□□□□ -1.52
NFX1Q12986 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.54□□□□□ -1.52
NFX1Q12986 AP001642.1-201ENST00000624727 2117 ntBASIC5.54□□□□□ -1.52
NFX1Q12986 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
NFX1Q12986 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NFX1Q12986 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NFX1Q12986 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NFX1Q12986 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
NFX1Q12986 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NFX1Q12986 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
NFX1Q12986 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NFX1Q12986 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
NFX1Q12986 ADAM5-202ENST00000399789 1942 ntBASIC5.53□□□□□ -1.52
NFX1Q12986 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NFX1Q12986 XIAPP3-201ENST00000312918 795 ntBASIC5.53□□□□□ -1.52
NFX1Q12986 Y_RNA.7-201ENST00000362352 102 ntBASIC5.53□□□□□ -1.52
NFX1Q12986 Y_RNA.286-201ENST00000364813 102 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms