Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDH1Q08174 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
PCDH1Q08174 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDH1Q08174 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDH1Q08174 Z75746.1-201ENST00000440243 2080 ntBASIC4.68□□□□□ -1.66
PCDH1Q08174 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDH1Q08174 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PCDH1Q08174 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDH1Q08174 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDH1Q08174 RN7SKP95-201ENST00000362860 303 ntBASIC4.67□□□□□ -1.66
PCDH1Q08174 SNORD14B-201ENST00000364533 90 ntBASIC4.67□□□□□ -1.66
PCDH1Q08174 AL645927.1-201ENST00000396783 406 ntBASIC4.67□□□□□ -1.66
PCDH1Q08174 MIR548M-201ENST00000408260 86 ntBASIC4.67□□□□□ -1.66
PCDH1Q08174 RNU6-1203P-201ENST00000410703 110 ntBASIC4.67□□□□□ -1.66
PCDH1Q08174 AC114755.2-201ENST00000413520 361 ntBASIC4.67□□□□□ -1.66
PCDH1Q08174 AL117339.3-201ENST00000418733 162 ntBASIC4.67□□□□□ -1.66
PCDH1Q08174 PIGPP3-201ENST00000425307 415 ntBASIC4.67□□□□□ -1.66
PCDH1Q08174 AC091390.3-201ENST00000426478 338 ntBASIC4.67□□□□□ -1.66
PCDH1Q08174 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDH1Q08174 AC004383.1-201ENST00000438135 289 ntBASIC4.67□□□□□ -1.66
PCDH1Q08174 NDUFB1P2-201ENST00000449477 176 ntBASIC4.67□□□□□ -1.66
PCDH1Q08174 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.67□□□□□ -1.66
PCDH1Q08174 RPL23AP45-201ENST00000476406 468 ntBASIC4.67□□□□□ -1.66
PCDH1Q08174 OR51K1P-201ENST00000510214 950 ntBASIC4.67□□□□□ -1.66
PCDH1Q08174 AC074250.1-201ENST00000511117 192 ntBASIC4.67□□□□□ -1.66
PCDH1Q08174 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDH1Q08174 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDH1Q08174 Y_RNA.700-201ENST00000516806 100 ntBASIC4.67□□□□□ -1.66
PCDH1Q08174 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDH1Q08174 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDH1Q08174 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDH1Q08174 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDH1Q08174 AC006557.5-201ENST00000603126 811 ntBASIC4.67□□□□□ -1.66
PCDH1Q08174 AC073410.2-201ENST00000603240 332 ntBASIC4.67□□□□□ -1.66
PCDH1Q08174 AC010201.1-201ENST00000605051 540 ntBASIC4.67□□□□□ -1.66
PCDH1Q08174 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDH1Q08174 MIR6798-201ENST00000612887 67 ntBASIC4.67□□□□□ -1.66
PCDH1Q08174 AP001282.2-201ENST00000616149 309 ntBASIC4.67□□□□□ -1.66
PCDH1Q08174 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDH1Q08174 AC137590.2-201ENST00000619709 240 ntBASIC4.67□□□□□ -1.66
PCDH1Q08174 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDH1Q08174 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
PCDH1Q08174 LINC01109-201ENST00000603837 3081 ntBASIC4.67□□□□□ -1.66
PCDH1Q08174 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDH1Q08174 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PCDH1Q08174 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDH1Q08174 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDH1Q08174 AC093535.2-201ENST00000624769 2326 ntBASIC4.67□□□□□ -1.66
PCDH1Q08174 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDH1Q08174 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
PCDH1Q08174 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PCDH1Q08174 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.66□□□□□ -1.66
PCDH1Q08174 AC099654.2-201ENST00000433031 1980 ntBASIC4.66□□□□□ -1.66
PCDH1Q08174 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
PCDH1Q08174 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDH1Q08174 Y_RNA.27-201ENST00000362540 103 ntBASIC4.66□□□□□ -1.66
PCDH1Q08174 Y_RNA.84-201ENST00000363011 104 ntBASIC4.66□□□□□ -1.66
PCDH1Q08174 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDH1Q08174 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDH1Q08174 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDH1Q08174 AC096920.1-201ENST00000423991 241 ntBASIC4.66□□□□□ -1.66
PCDH1Q08174 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDH1Q08174 AC098869.1-201ENST00000481627 292 ntBASIC4.66□□□□□ -1.66
PCDH1Q08174 AC093270.2-201ENST00000486157 792 ntBASIC4.66□□□□□ -1.66
PCDH1Q08174 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDH1Q08174 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDH1Q08174 AC091144.1-201ENST00000519573 138 ntBASIC4.66□□□□□ -1.66
PCDH1Q08174 AC022080.3-201ENST00000544433 482 ntBASIC4.66□□□□□ -1.66
PCDH1Q08174 AC009779.6-201ENST00000603972 165 ntBASIC4.66□□□□□ -1.66
PCDH1Q08174 AC009318.2-201ENST00000610917 651 ntBASIC4.66□□□□□ -1.66
PCDH1Q08174 AC243829.7-201ENST00000633081 225 ntBASIC4.66□□□□□ -1.66
PCDH1Q08174 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDH1Q08174 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDH1Q08174 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
PCDH1Q08174 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDH1Q08174 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDH1Q08174 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDH1Q08174 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDH1Q08174 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
PCDH1Q08174 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PCDH1Q08174 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
PCDH1Q08174 TLK1P1-201ENST00000456760 2440 ntBASIC4.65□□□□□ -1.66
PCDH1Q08174 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.65□□□□□ -1.66
PCDH1Q08174 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.65□□□□□ -1.66
PCDH1Q08174 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PCDH1Q08174 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
PCDH1Q08174 INTS6P1-201ENST00000504674 2530 ntBASIC4.65□□□□□ -1.66
PCDH1Q08174 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDH1Q08174 DEFB108F-201ENST00000344638 222 ntBASIC4.65□□□□□ -1.67
PCDH1Q08174 SNORD50.1-201ENST00000362987 71 ntBASIC4.65□□□□□ -1.67
PCDH1Q08174 RNU6-338P-201ENST00000383888 105 ntBASIC4.65□□□□□ -1.67
PCDH1Q08174 Y_RNA.555-201ENST00000384673 110 ntBASIC4.65□□□□□ -1.67
PCDH1Q08174 AL645733.1-201ENST00000402250 217 ntBASIC4.65□□□□□ -1.67
PCDH1Q08174 AL022722.2-201ENST00000402519 180 ntBASIC4.65□□□□□ -1.67
PCDH1Q08174 Y_RNA.623-201ENST00000411128 95 ntBASIC4.65□□□□□ -1.67
PCDH1Q08174 TOMM20P4-201ENST00000427861 435 ntBASIC4.65□□□□□ -1.67
PCDH1Q08174 RPL23AP25-201ENST00000430973 463 ntBASIC4.65□□□□□ -1.67
PCDH1Q08174 FABP5P15-201ENST00000453566 214 ntBASIC4.65□□□□□ -1.67
PCDH1Q08174 RN7SL808P-201ENST00000496066 299 ntBASIC4.65□□□□□ -1.67
PCDH1Q08174 MLLT10P2-201ENST00000506434 249 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms