Protein–RNA interactions for Protein: Q01831

XPC, DNA repair protein complementing XP-C cells, humanhuman

Predicted RBP Predictions only

Length 940 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPCQ01831 SNORD70.1-201ENST00000391007 85 ntBASIC5.24□□□□□ -1.57
XPCQ01831 EIF4E2P1-201ENST00000393781 255 ntBASIC5.24□□□□□ -1.57
XPCQ01831 CISD1P1-201ENST00000393907 327 ntBASIC5.24□□□□□ -1.57
XPCQ01831 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.24□□□□□ -1.57
XPCQ01831 ATP5A1P2-201ENST00000412323 255 ntBASIC5.24□□□□□ -1.57
XPCQ01831 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.24□□□□□ -1.57
XPCQ01831 AC005534.2-201ENST00000431047 433 ntBASIC5.24□□□□□ -1.57
XPCQ01831 RPS3AP46-201ENST00000448352 682 ntBASIC5.24□□□□□ -1.57
XPCQ01831 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.24□□□□□ -1.57
XPCQ01831 RPL23AP94-201ENST00000512518 302 ntBASIC5.24□□□□□ -1.57
XPCQ01831 Y_RNA.682-201ENST00000516457 100 ntBASIC5.24□□□□□ -1.57
XPCQ01831 RNU6-1088P-201ENST00000516850 104 ntBASIC5.24□□□□□ -1.57
XPCQ01831 RNU6-273P-201ENST00000516937 96 ntBASIC5.24□□□□□ -1.57
XPCQ01831 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.24□□□□□ -1.57
XPCQ01831 POLR3GP2-201ENST00000588366 668 ntBASIC5.24□□□□□ -1.57
XPCQ01831 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.24□□□□□ -1.57
XPCQ01831 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.24□□□□□ -1.57
XPCQ01831 MTND5P42-201ENST00000637720 498 ntBASIC5.24□□□□□ -1.57
XPCQ01831 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.24□□□□□ -1.57
XPCQ01831 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
XPCQ01831 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.24□□□□□ -1.57
XPCQ01831 NOL8P1-201ENST00000508336 3529 ntBASIC5.24□□□□□ -1.57
XPCQ01831 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
XPCQ01831 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC5.24□□□□□ -1.57
XPCQ01831 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
XPCQ01831 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
XPCQ01831 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
XPCQ01831 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.23□□□□□ -1.57
XPCQ01831 AC004925.1-201ENST00000624256 2706 ntBASIC5.23□□□□□ -1.57
XPCQ01831 RNU6-288P-201ENST00000363690 104 ntBASIC5.23□□□□□ -1.57
XPCQ01831 RNA5SP219-201ENST00000390940 113 ntBASIC5.23□□□□□ -1.57
XPCQ01831 BX682237.1-201ENST00000415016 335 ntBASIC5.23□□□□□ -1.57
XPCQ01831 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.23□□□□□ -1.57
XPCQ01831 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.23□□□□□ -1.57
XPCQ01831 RNU6-953P-201ENST00000459154 107 ntBASIC5.23□□□□□ -1.57
XPCQ01831 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.23□□□□□ -1.57
XPCQ01831 HIGD1AP13-201ENST00000509878 289 ntBASIC5.23□□□□□ -1.57
XPCQ01831 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.23□□□□□ -1.57
XPCQ01831 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.23□□□□□ -1.57
XPCQ01831 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC5.23□□□□□ -1.57
XPCQ01831 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
XPCQ01831 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.23□□□□□ -1.57
XPCQ01831 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.23□□□□□ -1.57
XPCQ01831 FAM60BP-201ENST00000578364 658 ntBASIC5.23□□□□□ -1.57
XPCQ01831 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.23□□□□□ -1.57
XPCQ01831 BDH2P1-201ENST00000602288 736 ntBASIC5.23□□□□□ -1.57
XPCQ01831 AC104662.1-201ENST00000604448 511 ntBASIC5.23□□□□□ -1.57
XPCQ01831 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.23□□□□□ -1.57
XPCQ01831 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
XPCQ01831 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.23□□□□□ -1.57
XPCQ01831 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC5.23□□□□□ -1.57
XPCQ01831 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
XPCQ01831 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
XPCQ01831 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
XPCQ01831 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
XPCQ01831 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.22□□□□□ -1.57
XPCQ01831 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
XPCQ01831 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.22□□□□□ -1.57
XPCQ01831 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
XPCQ01831 SNORA63-201ENST00000363450 132 ntBASIC5.22□□□□□ -1.57
XPCQ01831 SNORD74.4-201ENST00000364129 80 ntBASIC5.22□□□□□ -1.57
XPCQ01831 RNU6-335P-201ENST00000364563 113 ntBASIC5.22□□□□□ -1.57
XPCQ01831 SNORA16.2-201ENST00000390991 127 ntBASIC5.22□□□□□ -1.57
XPCQ01831 RNU6-817P-201ENST00000391083 104 ntBASIC5.22□□□□□ -1.57
XPCQ01831 AC096664.2-201ENST00000411843 406 ntBASIC5.22□□□□□ -1.57
XPCQ01831 MTCO2P12-201ENST00000427426 682 ntBASIC5.22□□□□□ -1.57
XPCQ01831 SNORD19B-201ENST00000459623 84 ntBASIC5.22□□□□□ -1.57
XPCQ01831 RPL7P43-201ENST00000478876 753 ntBASIC5.22□□□□□ -1.57
XPCQ01831 MLLT10P2-201ENST00000506434 249 ntBASIC5.22□□□□□ -1.57
XPCQ01831 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.22□□□□□ -1.57
XPCQ01831 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.22□□□□□ -1.57
XPCQ01831 AC022968.1-201ENST00000567372 442 ntBASIC5.22□□□□□ -1.57
XPCQ01831 SNRPGP15-201ENST00000600149 222 ntBASIC5.22□□□□□ -1.57
XPCQ01831 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.22□□□□□ -1.57
XPCQ01831 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.22□□□□□ -1.57
XPCQ01831 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
XPCQ01831 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
XPCQ01831 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
XPCQ01831 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
XPCQ01831 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
XPCQ01831 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.57
XPCQ01831 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
XPCQ01831 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
XPCQ01831 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
XPCQ01831 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.21□□□□□ -1.57
XPCQ01831 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.21□□□□□ -1.57
XPCQ01831 AC007390.2-201ENST00000606229 3803 ntBASIC5.21□□□□□ -1.57
XPCQ01831 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.21□□□□□ -1.57
XPCQ01831 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
XPCQ01831 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
XPCQ01831 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
XPCQ01831 RNU1-15P-201ENST00000353977 144 ntBASIC5.21□□□□□ -1.58
XPCQ01831 RNU6-254P-201ENST00000363377 107 ntBASIC5.21□□□□□ -1.58
XPCQ01831 Y_RNA.339-201ENST00000365325 102 ntBASIC5.21□□□□□ -1.58
XPCQ01831 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
XPCQ01831 RNU6-393P-201ENST00000384475 107 ntBASIC5.21□□□□□ -1.58
XPCQ01831 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
XPCQ01831 AL139039.1-201ENST00000401900 692 ntBASIC5.21□□□□□ -1.58
XPCQ01831 HIST1H2APS3-201ENST00000403259 134 ntBASIC5.21□□□□□ -1.58
XPCQ01831 RNA5SP104-201ENST00000410989 118 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms