Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC025165.5-201ENST00000602802 578 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 AC021749.1-201ENST00000604322 607 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 MIR6078-201ENST00000611069 100 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
ABCA4P78363 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
ABCA4P78363 RNU1-93P-201ENST00000364704 169 ntBASIC1.16□□□□□ -2.22
ABCA4P78363 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
ABCA4P78363 SNORA51.12-201ENST00000384448 134 ntBASIC1.16□□□□□ -2.22
ABCA4P78363 AC018630.2-202ENST00000422992 927 ntBASIC1.16□□□□□ -2.22
ABCA4P78363 TAAR7P-201ENST00000436141 242 ntBASIC1.16□□□□□ -2.22
ABCA4P78363 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
ABCA4P78363 HMGN3P1-201ENST00000453847 193 ntBASIC1.16□□□□□ -2.22
ABCA4P78363 AC006390.1-201ENST00000508068 283 ntBASIC1.16□□□□□ -2.22
ABCA4P78363 SCARNA3-201ENST00000517097 143 ntBASIC1.16□□□□□ -2.22
ABCA4P78363 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.16□□□□□ -2.22
ABCA4P78363 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.16□□□□□ -2.22
ABCA4P78363 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.16□□□□□ -2.22
ABCA4P78363 AC010928.2-201ENST00000588017 287 ntBASIC1.16□□□□□ -2.22
ABCA4P78363 AC012443.1-201ENST00000605605 231 ntBASIC1.16□□□□□ -2.22
ABCA4P78363 AC017104.5-201ENST00000637647 639 ntBASIC1.16□□□□□ -2.22
ABCA4P78363 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.16□□□□□ -2.22
ABCA4P78363 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
ABCA4P78363 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.16□□□□□ -2.22
ABCA4P78363 RNA5SP363-201ENST00000365072 115 ntBASIC1.15□□□□□ -2.22
ABCA4P78363 RPS3AP24-201ENST00000407896 734 ntBASIC1.15□□□□□ -2.22
ABCA4P78363 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.22
ABCA4P78363 RPL31P60-201ENST00000478450 367 ntBASIC1.15□□□□□ -2.22
ABCA4P78363 AC022493.1-201ENST00000492984 337 ntBASIC1.15□□□□□ -2.22
ABCA4P78363 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.15□□□□□ -2.22
ABCA4P78363 MRPS17P9-201ENST00000511924 393 ntBASIC1.15□□□□□ -2.22
ABCA4P78363 RNU6-798P-201ENST00000516912 103 ntBASIC1.15□□□□□ -2.22
ABCA4P78363 AP005435.4-201ENST00000529514 284 ntBASIC1.15□□□□□ -2.22
ABCA4P78363 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.22
ABCA4P78363 SULT1C2P1-202ENST00000562418 459 ntBASIC1.15□□□□□ -2.22
ABCA4P78363 MIR4287-201ENST00000579398 78 ntBASIC1.15□□□□□ -2.22
ABCA4P78363 CBX3P2-202ENST00000583365 535 ntBASIC1.15□□□□□ -2.22
ABCA4P78363 AL109918.3-201ENST00000603072 338 ntBASIC1.15□□□□□ -2.22
ABCA4P78363 AC073413.2-201ENST00000604332 360 ntBASIC1.15□□□□□ -2.22
ABCA4P78363 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
ABCA4P78363 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
ABCA4P78363 SNORA3A-201ENST00000364113 130 ntBASIC1.15□□□□□ -2.23
ABCA4P78363 Y_RNA.458-201ENST00000384240 102 ntBASIC1.15□□□□□ -2.23
ABCA4P78363 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.15□□□□□ -2.23
ABCA4P78363 HMGB1P9-201ENST00000429856 646 ntBASIC1.15□□□□□ -2.23
ABCA4P78363 RPL35AP22-201ENST00000436855 335 ntBASIC1.15□□□□□ -2.23
ABCA4P78363 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.15□□□□□ -2.23
ABCA4P78363 AC079776.3-201ENST00000450665 370 ntBASIC1.15□□□□□ -2.23
ABCA4P78363 RPS27P21-201ENST00000486977 252 ntBASIC1.15□□□□□ -2.23
ABCA4P78363 RNA5SP476-201ENST00000516613 103 ntBASIC1.15□□□□□ -2.23
ABCA4P78363 RNA5SP337-201ENST00000517007 109 ntBASIC1.15□□□□□ -2.23
ABCA4P78363 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.15□□□□□ -2.23
ABCA4P78363 AL391261.3-201ENST00000557194 520 ntBASIC1.15□□□□□ -2.23
ABCA4P78363 AC074051.3-201ENST00000570238 358 ntBASIC1.15□□□□□ -2.23
ABCA4P78363 MTCO1P40-201ENST00000574371 625 ntBASIC1.15□□□□□ -2.23
ABCA4P78363 FAM60BP-201ENST00000578364 658 ntBASIC1.15□□□□□ -2.23
ABCA4P78363 AC105224.1-201ENST00000587055 421 ntBASIC1.15□□□□□ -2.23
ABCA4P78363 OR1M4P-201ENST00000589199 287 ntBASIC1.15□□□□□ -2.23
ABCA4P78363 BNIP3P4-201ENST00000604946 565 ntBASIC1.15□□□□□ -2.23
ABCA4P78363 DUXAP9-208ENST00000622815 614 ntBASIC1.15□□□□□ -2.23
ABCA4P78363 RBBP8P1-201ENST00000449447 1844 ntBASIC1.15□□□□□ -2.23
ABCA4P78363 RNU6-516P-201ENST00000411381 104 ntBASIC1.14□□□□□ -2.23
ABCA4P78363 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.14□□□□□ -2.23
ABCA4P78363 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.14□□□□□ -2.23
ABCA4P78363 AL365400.1-201ENST00000431854 640 ntBASIC1.14□□□□□ -2.23
ABCA4P78363 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.14□□□□□ -2.23
ABCA4P78363 SNORD121B-201ENST00000458838 81 ntBASIC1.14□□□□□ -2.23
ABCA4P78363 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.14□□□□□ -2.23
ABCA4P78363 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.14□□□□□ -2.23
ABCA4P78363 AC118273.2-201ENST00000532092 465 ntBASIC1.14□□□□□ -2.23
ABCA4P78363 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.14□□□□□ -2.23
ABCA4P78363 MIR5571-201ENST00000577998 113 ntBASIC1.14□□□□□ -2.23
ABCA4P78363 MIR4529-201ENST00000578110 78 ntBASIC1.14□□□□□ -2.23
ABCA4P78363 AL355877.2-201ENST00000603670 358 ntBASIC1.14□□□□□ -2.23
ABCA4P78363 AC007038.2-201ENST00000608095 740 ntBASIC1.14□□□□□ -2.23
ABCA4P78363 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.14□□□□□ -2.23
ABCA4P78363 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
ABCA4P78363 CDC27P3-201ENST00000635418 1910 ntBASIC1.14□□□□□ -2.23
ABCA4P78363 RNU4-23P-201ENST00000362839 140 ntBASIC1.14□□□□□ -2.23
ABCA4P78363 MIR147B-201ENST00000390185 80 ntBASIC1.14□□□□□ -2.23
ABCA4P78363 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.14□□□□□ -2.23
ABCA4P78363 AC092047.1-201ENST00000424997 240 ntBASIC1.14□□□□□ -2.23
ABCA4P78363 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.14□□□□□ -2.23
ABCA4P78363 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.14□□□□□ -2.23
ABCA4P78363 AC096571.1-202ENST00000506634 735 ntBASIC1.14□□□□□ -2.23
ABCA4P78363 COL6A4P2-205ENST00000509855 506 ntBASIC1.14□□□□□ -2.23
ABCA4P78363 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.14□□□□□ -2.23
ABCA4P78363 OR8K4P-201ENST00000534608 872 ntBASIC1.14□□□□□ -2.23
ABCA4P78363 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.14□□□□□ -2.23
ABCA4P78363 AC012254.4-201ENST00000588843 273 ntBASIC1.14□□□□□ -2.23
ABCA4P78363 AC011712.1-201ENST00000588959 234 ntBASIC1.14□□□□□ -2.23
ABCA4P78363 AL391646.1-201ENST00000603860 190 ntBASIC1.14□□□□□ -2.23
ABCA4P78363 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
ABCA4P78363 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
ABCA4P78363 RNU6-220P-201ENST00000390919 107 ntBASIC1.13□□□□□ -2.23
ABCA4P78363 AL512604.1-201ENST00000404812 257 ntBASIC1.13□□□□□ -2.23
ABCA4P78363 AL445669.1-201ENST00000426743 755 ntBASIC1.13□□□□□ -2.23
ABCA4P78363 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.13□□□□□ -2.23
ABCA4P78363 AC005297.2-201ENST00000450430 606 ntBASIC1.13□□□□□ -2.23
ABCA4P78363 TRGVB-201ENST00000453257 471 ntBASIC1.13□□□□□ -2.23
ABCA4P78363 HAR1A.1-201ENST00000459583 118 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms