Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MTATP6P3-201ENST00000581686 676 ntBASIC3.11□□□□□ -1.91
CLDN20P56880 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.11□□□□□ -1.91
CLDN20P56880 AC013553.2-201ENST00000604244 589 ntBASIC3.11□□□□□ -1.91
CLDN20P56880 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN20P56880 AC084757.4-201ENST00000616350 526 ntBASIC3.11□□□□□ -1.91
CLDN20P56880 AL355365.1-201ENST00000616480 294 ntBASIC3.11□□□□□ -1.91
CLDN20P56880 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN20P56880 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN20P56880 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN20P56880 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN20P56880 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN20P56880 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CLDN20P56880 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN20P56880 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN20P56880 ELF2P3-201ENST00000445099 1506 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 RNU4-12P-201ENST00000365233 139 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN20P56880 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN20P56880 SNORA24.1-201ENST00000384401 135 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 AC068050.1-201ENST00000394891 380 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
CLDN20P56880 Z85995.1-201ENST00000415547 335 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN20P56880 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN20P56880 AC012498.1-201ENST00000424037 437 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN20P56880 AC097713.2-201ENST00000430199 356 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN20P56880 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN20P56880 RNU6-953P-201ENST00000459154 107 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 AC008155.2-201ENST00000464337 397 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN20P56880 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN20P56880 IGKV2-26-201ENST00000518305 343 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN20P56880 ATP5F1P5-201ENST00000526403 760 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 OR5AQ1P-201ENST00000527596 927 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 OR5B19P-201ENST00000531766 928 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN20P56880 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN20P56880 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN20P56880 AL157687.1-201ENST00000554853 619 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 AL512360.1-201ENST00000555346 234 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN20P56880 AC027807.1-201ENST00000559921 996 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN20P56880 AC025678.1-201ENST00000567861 338 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 AC024619.4-201ENST00000580924 316 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 AC007621.1-201ENST00000604544 437 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 AC034102.8-201ENST00000615146 484 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 AP001486.3-201ENST00000615334 372 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 MIR7975-201ENST00000619350 68 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 AC025034.2-201ENST00000623264 286 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 AL160394.1-201ENST00000624765 724 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN20P56880 SRP72P2-201ENST00000344851 1979 ntBASIC3.1□□□□□ -1.91
CLDN20P56880 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN20P56880 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN20P56880 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CLDN20P56880 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN20P56880 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CLDN20P56880 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN20P56880 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN20P56880 RNU6-61P-201ENST00000365528 109 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 RNU6-741P-201ENST00000383889 107 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 Y_RNA.450-201ENST00000384198 113 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 RNU6-780P-201ENST00000391030 104 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 RNU6-1197P-201ENST00000391183 107 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN20P56880 AP000567.1-201ENST00000406413 156 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 RNU6-387P-201ENST00000411331 105 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 BX323014.1-201ENST00000412876 237 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN20P56880 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN20P56880 MRPL50P2-201ENST00000416821 482 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 UBE2D3P2-201ENST00000424409 445 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.09□□□□□ -1.91
CLDN20P56880 NDUFB4P6-201ENST00000436819 366 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 RPL7P54-201ENST00000438336 674 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 AC009969.1-201ENST00000438726 172 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 FDX1P2-201ENST00000450769 375 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.09□□□□□ -1.91
CLDN20P56880 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN20P56880 RNU7-63P-201ENST00000459054 62 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 RPL21P10-201ENST00000463521 490 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN20P56880 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN20P56880 AC108078.2-201ENST00000510750 236 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 RNU6-677P-201ENST00000516914 101 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 AC245166.1-201ENST00000521012 253 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 OR5AL2P-201ENST00000532185 920 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 AK6P1-201ENST00000540219 478 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN20P56880 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN20P56880 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN20P56880 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.09□□□□□ -1.91
CLDN20P56880 AP001094.1-201ENST00000579805 193 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 MIR4775-201ENST00000581168 75 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN20P56880 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms