Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NUBP1P53384 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.1□□□□□ -1.43
NUBP1P53384 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NUBP1P53384 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.09□□□□□ -1.43
NUBP1P53384 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUBP1P53384 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.09□□□□□ -1.43
NUBP1P53384 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
NUBP1P53384 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUBP1P53384 RN7SKP104-201ENST00000362605 328 ntBASIC6.09□□□□□ -1.43
NUBP1P53384 MIR1278-201ENST00000408753 81 ntBASIC6.09□□□□□ -1.43
NUBP1P53384 CYCSP48-201ENST00000417124 323 ntBASIC6.09□□□□□ -1.43
NUBP1P53384 RPL7AP49-201ENST00000429522 581 ntBASIC6.09□□□□□ -1.43
NUBP1P53384 AL591438.1-201ENST00000433508 581 ntBASIC6.09□□□□□ -1.43
NUBP1P53384 AC092967.1-201ENST00000449016 481 ntBASIC6.09□□□□□ -1.43
NUBP1P53384 RPS29P22-201ENST00000472363 168 ntBASIC6.09□□□□□ -1.43
NUBP1P53384 RPL7AP6-201ENST00000477943 801 ntBASIC6.09□□□□□ -1.43
NUBP1P53384 RNU6-615P-201ENST00000516065 106 ntBASIC6.09□□□□□ -1.43
NUBP1P53384 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.09□□□□□ -1.43
NUBP1P53384 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC6.09□□□□□ -1.43
NUBP1P53384 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC6.09□□□□□ -1.43
NUBP1P53384 AC105137.2-201ENST00000569073 466 ntBASIC6.09□□□□□ -1.43
NUBP1P53384 MIR4646-201ENST00000580775 63 ntBASIC6.09□□□□□ -1.43
NUBP1P53384 MRPL57P1-201ENST00000621486 265 ntBASIC6.09□□□□□ -1.43
NUBP1P53384 AL132640.3-201ENST00000630473 177 ntBASIC6.09□□□□□ -1.43
NUBP1P53384 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
NUBP1P53384 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
NUBP1P53384 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUBP1P53384 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
NUBP1P53384 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
NUBP1P53384 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUBP1P53384 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
NUBP1P53384 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
NUBP1P53384 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC6.08□□□□□ -1.44
NUBP1P53384 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.08□□□□□ -1.44
NUBP1P53384 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
NUBP1P53384 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NUBP1P53384 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.08□□□□□ -1.44
NUBP1P53384 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.08□□□□□ -1.44
NUBP1P53384 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
NUBP1P53384 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NUBP1P53384 SNORD114-7-201ENST00000362520 77 ntBASIC6.08□□□□□ -1.44
NUBP1P53384 RNA5SP333-201ENST00000363466 118 ntBASIC6.08□□□□□ -1.44
NUBP1P53384 RN7SKP224-201ENST00000364140 325 ntBASIC6.08□□□□□ -1.44
NUBP1P53384 RNA5SP500-201ENST00000364486 119 ntBASIC6.08□□□□□ -1.44
NUBP1P53384 RNA5SP334-201ENST00000364825 118 ntBASIC6.08□□□□□ -1.44
NUBP1P53384 SNORA56-201ENST00000383966 129 ntBASIC6.08□□□□□ -1.44
NUBP1P53384 MIR541-201ENST00000401360 84 ntBASIC6.08□□□□□ -1.44
NUBP1P53384 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.08□□□□□ -1.44
NUBP1P53384 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC6.08□□□□□ -1.44
NUBP1P53384 HMGN2P32-201ENST00000444648 269 ntBASIC6.08□□□□□ -1.44
NUBP1P53384 RANP2-201ENST00000456833 229 ntBASIC6.08□□□□□ -1.44
NUBP1P53384 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.08□□□□□ -1.44
NUBP1P53384 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC6.08□□□□□ -1.44
NUBP1P53384 RNU6-970P-201ENST00000516312 107 ntBASIC6.08□□□□□ -1.44
NUBP1P53384 AC096996.1-201ENST00000563813 325 ntBASIC6.08□□□□□ -1.44
NUBP1P53384 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.08□□□□□ -1.44
NUBP1P53384 MIR3691-201ENST00000578066 90 ntBASIC6.08□□□□□ -1.44
NUBP1P53384 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.08□□□□□ -1.44
NUBP1P53384 AP003357.1-201ENST00000604497 148 ntBASIC6.08□□□□□ -1.44
NUBP1P53384 AL034555.1-201ENST00000604816 211 ntBASIC6.08□□□□□ -1.44
NUBP1P53384 AC099778.2-201ENST00000610904 211 ntBASIC6.08□□□□□ -1.44
NUBP1P53384 AL354718.1-201ENST00000619764 589 ntBASIC6.08□□□□□ -1.44
NUBP1P53384 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
NUBP1P53384 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
NUBP1P53384 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
NUBP1P53384 AL021877.2-201ENST00000624442 10684 ntBASIC6.08□□□□□ -1.44
NUBP1P53384 AL592437.2-201ENST00000421655 2434 ntBASIC6.08□□□□□ -1.44
NUBP1P53384 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NUBP1P53384 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NUBP1P53384 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.08□□□□□ -1.44
NUBP1P53384 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NUBP1P53384 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NUBP1P53384 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.07□□□□□ -1.44
NUBP1P53384 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.07□□□□□ -1.44
NUBP1P53384 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
NUBP1P53384 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.07□□□□□ -1.44
NUBP1P53384 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
NUBP1P53384 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NUBP1P53384 PPIAP31-201ENST00000405422 495 ntBASIC6.07□□□□□ -1.44
NUBP1P53384 AL096829.1-201ENST00000413677 457 ntBASIC6.07□□□□□ -1.44
NUBP1P53384 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.07□□□□□ -1.44
NUBP1P53384 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC6.07□□□□□ -1.44
NUBP1P53384 AZGP1P2-201ENST00000454506 345 ntBASIC6.07□□□□□ -1.44
NUBP1P53384 AC090515.1-201ENST00000465295 476 ntBASIC6.07□□□□□ -1.44
NUBP1P53384 RNU5F-2P-201ENST00000516066 82 ntBASIC6.07□□□□□ -1.44
NUBP1P53384 snoMBII-202.2-201ENST00000517263 86 ntBASIC6.07□□□□□ -1.44
NUBP1P53384 EIF4A1P12-201ENST00000551910 141 ntBASIC6.07□□□□□ -1.44
NUBP1P53384 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC6.07□□□□□ -1.44
NUBP1P53384 AC074050.1-201ENST00000563247 211 ntBASIC6.07□□□□□ -1.44
NUBP1P53384 PCGEM1.1-201ENST00000613431 131 ntBASIC6.07□□□□□ -1.44
NUBP1P53384 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC6.07□□□□□ -1.44
NUBP1P53384 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC6.07□□□□□ -1.44
NUBP1P53384 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NUBP1P53384 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.07□□□□□ -1.44
NUBP1P53384 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NUBP1P53384 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NUBP1P53384 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NUBP1P53384 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
NUBP1P53384 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
NUBP1P53384 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms