Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXC12P31275 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXC12P31275 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXC12P31275 AC009643.2-201ENST00000603543 1448 ntBASIC4.22□□□□□ -1.73
HOXC12P31275 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
HOXC12P31275 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HOXC12P31275 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
HOXC12P31275 U3.22-201ENST00000391120 215 ntBASIC4.22□□□□□ -1.73
HOXC12P31275 Z98745.1-201ENST00000402553 494 ntBASIC4.22□□□□□ -1.73
HOXC12P31275 RNU6-55P-201ENST00000411092 107 ntBASIC4.22□□□□□ -1.73
HOXC12P31275 AL592148.1-201ENST00000413568 445 ntBASIC4.22□□□□□ -1.73
HOXC12P31275 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXC12P31275 PGBD4P6-201ENST00000421501 610 ntBASIC4.22□□□□□ -1.73
HOXC12P31275 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXC12P31275 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXC12P31275 AC016831.4-201ENST00000438302 307 ntBASIC4.22□□□□□ -1.73
HOXC12P31275 GSTA11P-201ENST00000452866 669 ntBASIC4.22□□□□□ -1.73
HOXC12P31275 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXC12P31275 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HOXC12P31275 AC068781.1-201ENST00000488231 618 ntBASIC4.22□□□□□ -1.73
HOXC12P31275 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXC12P31275 RN7SL558P-201ENST00000497468 299 ntBASIC4.22□□□□□ -1.73
HOXC12P31275 AC005921.1-201ENST00000510589 286 ntBASIC4.22□□□□□ -1.73
HOXC12P31275 RNA5SP73-201ENST00000516744 108 ntBASIC4.22□□□□□ -1.73
HOXC12P31275 AC025755.1-201ENST00000521306 278 ntBASIC4.22□□□□□ -1.73
HOXC12P31275 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXC12P31275 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXC12P31275 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXC12P31275 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXC12P31275 RNF138P2-201ENST00000603490 592 ntBASIC4.22□□□□□ -1.73
HOXC12P31275 AL356218.2-201ENST00000605264 187 ntBASIC4.22□□□□□ -1.73
HOXC12P31275 AL591516.1-201ENST00000611326 274 ntBASIC4.22□□□□□ -1.73
HOXC12P31275 AC023043.4-201ENST00000612081 449 ntBASIC4.22□□□□□ -1.73
HOXC12P31275 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXC12P31275 AL162373.1-201ENST00000620433 407 ntBASIC4.22□□□□□ -1.73
HOXC12P31275 AC112200.1-201ENST00000625015 234 ntBASIC4.22□□□□□ -1.73
HOXC12P31275 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HOXC12P31275 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HOXC12P31275 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.22□□□□□ -1.73
HOXC12P31275 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXC12P31275 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXC12P31275 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
HOXC12P31275 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
HOXC12P31275 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HOXC12P31275 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXC12P31275 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HOXC12P31275 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
HOXC12P31275 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HOXC12P31275 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HOXC12P31275 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC12P31275 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.21□□□□□ -1.74
HOXC12P31275 ADAM5-202ENST00000399789 1942 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.21□□□□□ -1.74
HOXC12P31275 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXC12P31275 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC12P31275 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC12P31275 RNA5SP388-201ENST00000362584 119 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 RNU6-37P-201ENST00000362692 107 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 RNU6-11P-201ENST00000364234 107 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 RNU6-7-201ENST00000364784 107 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 RNU6-384P-201ENST00000364900 104 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 RNU6-8-201ENST00000365467 107 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 RNU6-25P-201ENST00000383873 107 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 RNU6-1-201ENST00000383898 107 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 SNORA70F-201ENST00000384142 135 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 RNU6-48P-201ENST00000384161 107 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 RNU6-36P-201ENST00000384172 107 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 RNU6-4P-201ENST00000384205 107 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 RNU6-5P-201ENST00000384238 107 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 RNU6-3P-201ENST00000384314 107 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 RNU6-16P-201ENST00000384385 107 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 Y_RNA.496-201ENST00000384444 101 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 RNU6-15P-201ENST00000384534 107 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 Y_RNA.527-201ENST00000384573 102 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 RNU6-2-201ENST00000384627 107 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 RNU6-29P-201ENST00000384637 107 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 RNU6-9-201ENST00000384776 107 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 RNU6-33P-201ENST00000384793 107 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 RNU2-33P-201ENST00000410344 192 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 AC096664.2-201ENST00000411843 406 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.21□□□□□ -1.74
HOXC12P31275 AC243428.1-201ENST00000421099 264 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 AC005154.2-201ENST00000438110 379 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC12P31275 RPL23AP56-201ENST00000460778 453 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 RPL9P32-201ENST00000464118 620 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.21□□□□□ -1.74
HOXC12P31275 RPL12P20-201ENST00000475538 479 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 RN7SL41P-201ENST00000476144 297 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 HMGN1P11-201ENST00000508668 303 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 NDUFB4P9-201ENST00000511646 388 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 RNU6-764P-201ENST00000516396 105 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.21□□□□□ -1.74
HOXC12P31275 AC053481.4-201ENST00000583164 216 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 AC022726.1-201ENST00000587475 207 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 RNU6-6P-201ENST00000606623 107 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 7SK.10-201ENST00000621414 298 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 AC066616.2-201ENST00000559334 1481 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXC12P31275 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms