Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC107294.3-201ENST00000609211 526 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 AC093838.1-201ENST00000613014 469 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 AP001506.1-201ENST00000615444 211 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HOXC8P31273 AC007318.2-201ENST00000620999 243 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 AP003122.6-201ENST00000623831 495 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC8P31273 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC8P31273 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC8P31273 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC8P31273 AC099654.13-201ENST00000639774 207 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 AC099654.12-201ENST00000639868 649 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC8P31273 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC8P31273 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HOXC8P31273 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HOXC8P31273 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXC8P31273 ZNF826P-207ENST00000622273 1910 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXC8P31273 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
HOXC8P31273 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HOXC8P31273 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HOXC8P31273 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HOXC8P31273 Y_RNA.6-201ENST00000362350 114 ntBASIC3.28□□□□□ -1.88
HOXC8P31273 Y_RNA.46-201ENST00000362695 102 ntBASIC3.28□□□□□ -1.88
HOXC8P31273 SNORA14A-201ENST00000364773 135 ntBASIC3.28□□□□□ -1.88
HOXC8P31273 RNY4P34-201ENST00000364779 95 ntBASIC3.28□□□□□ -1.88
HOXC8P31273 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXC8P31273 SPA17P1-201ENST00000416656 452 ntBASIC3.28□□□□□ -1.88
HOXC8P31273 MRPL50P2-201ENST00000416821 482 ntBASIC3.28□□□□□ -1.88
HOXC8P31273 HSPE1P1-201ENST00000421494 318 ntBASIC3.28□□□□□ -1.88
HOXC8P31273 TAAR7P-201ENST00000436141 242 ntBASIC3.28□□□□□ -1.88
HOXC8P31273 PGBD4P3-201ENST00000440731 581 ntBASIC3.28□□□□□ -1.88
HOXC8P31273 MTND6P13-201ENST00000443510 523 ntBASIC3.28□□□□□ -1.88
HOXC8P31273 RPL37P4-201ENST00000448908 268 ntBASIC3.28□□□□□ -1.88
HOXC8P31273 RPS15AP36-201ENST00000492022 382 ntBASIC3.28□□□□□ -1.88
HOXC8P31273 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HOXC8P31273 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXC8P31273 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXC8P31273 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXC8P31273 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXC8P31273 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXC8P31273 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXC8P31273 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXC8P31273 RNU6-1003P-201ENST00000517099 105 ntBASIC3.28□□□□□ -1.88
HOXC8P31273 IGHV3-76-201ENST00000522465 295 ntBASIC3.28□□□□□ -1.88
HOXC8P31273 CASP1P1-201ENST00000526345 212 ntBASIC3.28□□□□□ -1.88
HOXC8P31273 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXC8P31273 AC087883.1-201ENST00000551882 391 ntBASIC3.28□□□□□ -1.88
HOXC8P31273 HMGB1P14-201ENST00000557424 591 ntBASIC3.28□□□□□ -1.88
HOXC8P31273 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.28□□□□□ -1.88
HOXC8P31273 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXC8P31273 ATP1B3P1-201ENST00000605365 821 ntBASIC3.28□□□□□ -1.88
HOXC8P31273 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXC8P31273 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXC8P31273 TUG1_2.1-201ENST00000614234 87 ntBASIC3.28□□□□□ -1.88
HOXC8P31273 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXC8P31273 AC110994.2-201ENST00000635481 492 ntBASIC3.28□□□□□ -1.88
HOXC8P31273 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
HOXC8P31273 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HOXC8P31273 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
HOXC8P31273 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HOXC8P31273 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HOXC8P31273 MTND5P26-201ENST00000426018 1752 ntBASIC3.28□□□□□ -1.89
HOXC8P31273 AC092435.3-201ENST00000565538 3654 ntBASIC3.28□□□□□ -1.89
HOXC8P31273 RNU1-75P-201ENST00000347264 129 ntBASIC3.27□□□□□ -1.89
HOXC8P31273 AC062016.1-201ENST00000355719 319 ntBASIC3.27□□□□□ -1.89
HOXC8P31273 SNORA18.3-201ENST00000384122 132 ntBASIC3.27□□□□□ -1.89
HOXC8P31273 SAR1AP2-201ENST00000392696 594 ntBASIC3.27□□□□□ -1.89
HOXC8P31273 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC8P31273 FCF1P10-201ENST00000407590 479 ntBASIC3.27□□□□□ -1.89
HOXC8P31273 RNU6-195P-201ENST00000411352 109 ntBASIC3.27□□□□□ -1.89
HOXC8P31273 FCF1P9-201ENST00000412546 282 ntBASIC3.27□□□□□ -1.89
HOXC8P31273 TRIAP1P1-201ENST00000427062 225 ntBASIC3.27□□□□□ -1.89
HOXC8P31273 AC073614.1-201ENST00000438690 650 ntBASIC3.27□□□□□ -1.89
HOXC8P31273 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXC8P31273 AL162389.1-201ENST00000449233 177 ntBASIC3.27□□□□□ -1.89
HOXC8P31273 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXC8P31273 RNU6-420P-201ENST00000458780 107 ntBASIC3.27□□□□□ -1.89
HOXC8P31273 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXC8P31273 MTND1P3-201ENST00000484956 952 ntBASIC3.27□□□□□ -1.89
HOXC8P31273 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXC8P31273 RNU6-390P-201ENST00000516259 103 ntBASIC3.27□□□□□ -1.89
HOXC8P31273 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
HOXC8P31273 AP003122.4-201ENST00000530980 758 ntBASIC3.27□□□□□ -1.89
HOXC8P31273 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HOXC8P31273 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXC8P31273 CYCSP39-201ENST00000565821 309 ntBASIC3.27□□□□□ -1.89
HOXC8P31273 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXC8P31273 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXC8P31273 HMGN1P30-201ENST00000589286 268 ntBASIC3.27□□□□□ -1.89
HOXC8P31273 AP003465.2-201ENST00000602571 373 ntBASIC3.27□□□□□ -1.89
HOXC8P31273 AC068790.3-201ENST00000602988 553 ntBASIC3.27□□□□□ -1.89
HOXC8P31273 AL133393.1-201ENST00000603277 287 ntBASIC3.27□□□□□ -1.89
HOXC8P31273 HSPE1P7-201ENST00000604681 321 ntBASIC3.27□□□□□ -1.89
HOXC8P31273 AC007998.5-201ENST00000622938 237 ntBASIC3.27□□□□□ -1.89
HOXC8P31273 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXC8P31273 OR5AK4P-201ENST00000635912 903 ntBASIC3.27□□□□□ -1.89
HOXC8P31273 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC8P31273 AC103988.1-201ENST00000566382 2177 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms