Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.82□□□□□ -1.64
BMP4P12644 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
BMP4P12644 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
BMP4P12644 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
BMP4P12644 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
BMP4P12644 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
BMP4P12644 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
BMP4P12644 RNU6-879P-201ENST00000364328 108 ntBASIC4.82□□□□□ -1.64
BMP4P12644 RNU4-9P-201ENST00000364951 139 ntBASIC4.82□□□□□ -1.64
BMP4P12644 MIR569-201ENST00000385228 96 ntBASIC4.82□□□□□ -1.64
BMP4P12644 RNU6-882P-201ENST00000391025 103 ntBASIC4.82□□□□□ -1.64
BMP4P12644 AL357139.1-201ENST00000407792 426 ntBASIC4.82□□□□□ -1.64
BMP4P12644 RNU4-34P-201ENST00000410431 124 ntBASIC4.82□□□□□ -1.64
BMP4P12644 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.82□□□□□ -1.64
BMP4P12644 CR769767.1-201ENST00000436337 346 ntBASIC4.82□□□□□ -1.64
BMP4P12644 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.82□□□□□ -1.64
BMP4P12644 AC009237.7-201ENST00000447357 229 ntBASIC4.82□□□□□ -1.64
BMP4P12644 AC010409.1-201ENST00000487382 476 ntBASIC4.82□□□□□ -1.64
BMP4P12644 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.82□□□□□ -1.64
BMP4P12644 AC027308.1-201ENST00000517993 110 ntBASIC4.82□□□□□ -1.64
BMP4P12644 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.82□□□□□ -1.64
BMP4P12644 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.82□□□□□ -1.64
BMP4P12644 AC005828.6-201ENST00000606610 232 ntBASIC4.82□□□□□ -1.64
BMP4P12644 AC211433.2-201ENST00000608433 387 ntBASIC4.82□□□□□ -1.64
BMP4P12644 AC107294.1-201ENST00000609524 467 ntBASIC4.82□□□□□ -1.64
BMP4P12644 BX005214.3-202ENST00000619809 325 ntBASIC4.82□□□□□ -1.64
BMP4P12644 MIR6839-201ENST00000620425 113 ntBASIC4.82□□□□□ -1.64
BMP4P12644 AC132068.1-201ENST00000623805 459 ntBASIC4.82□□□□□ -1.64
BMP4P12644 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
BMP4P12644 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
BMP4P12644 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
BMP4P12644 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
BMP4P12644 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.82□□□□□ -1.64
BMP4P12644 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.82□□□□□ -1.64
BMP4P12644 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.82□□□□□ -1.64
BMP4P12644 LINC01109-201ENST00000603837 3081 ntBASIC4.82□□□□□ -1.64
BMP4P12644 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
BMP4P12644 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
BMP4P12644 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
BMP4P12644 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
BMP4P12644 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
BMP4P12644 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BMP4P12644 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.81□□□□□ -1.64
BMP4P12644 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BMP4P12644 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
BMP4P12644 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.81□□□□□ -1.64
BMP4P12644 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BMP4P12644 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.81□□□□□ -1.64
BMP4P12644 RNA5SP361-201ENST00000362686 118 ntBASIC4.81□□□□□ -1.64
BMP4P12644 RNU6-653P-201ENST00000363074 106 ntBASIC4.81□□□□□ -1.64
BMP4P12644 RNU6-17P-201ENST00000384245 107 ntBASIC4.81□□□□□ -1.64
BMP4P12644 RNU6-18P-201ENST00000384527 107 ntBASIC4.81□□□□□ -1.64
BMP4P12644 Y_RNA.570-201ENST00000384750 101 ntBASIC4.81□□□□□ -1.64
BMP4P12644 Y_RNA.571-201ENST00000384753 98 ntBASIC4.81□□□□□ -1.64
BMP4P12644 MIR223-201ENST00000385204 110 ntBASIC4.81□□□□□ -1.64
BMP4P12644 RNA5SP213-201ENST00000391031 106 ntBASIC4.81□□□□□ -1.64
BMP4P12644 SNORA46.1-201ENST00000391069 153 ntBASIC4.81□□□□□ -1.64
BMP4P12644 AL022722.2-201ENST00000402519 180 ntBASIC4.81□□□□□ -1.64
BMP4P12644 LAP3P1-201ENST00000403648 294 ntBASIC4.81□□□□□ -1.64
BMP4P12644 SNORD12B-201ENST00000410433 91 ntBASIC4.81□□□□□ -1.64
BMP4P12644 RNU2-50P-201ENST00000410494 143 ntBASIC4.81□□□□□ -1.64
BMP4P12644 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.81□□□□□ -1.64
BMP4P12644 AP000907.1-201ENST00000428428 510 ntBASIC4.81□□□□□ -1.64
BMP4P12644 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.81□□□□□ -1.64
BMP4P12644 KNOP1P3-201ENST00000446933 426 ntBASIC4.81□□□□□ -1.64
BMP4P12644 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.81□□□□□ -1.64
BMP4P12644 TPT1P12-201ENST00000448968 492 ntBASIC4.81□□□□□ -1.64
BMP4P12644 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.81□□□□□ -1.64
BMP4P12644 RNA5SP34-201ENST00000516887 130 ntBASIC4.81□□□□□ -1.64
BMP4P12644 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.81□□□□□ -1.64
BMP4P12644 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.81□□□□□ -1.64
BMP4P12644 MIR5692C2-201ENST00000577959 77 ntBASIC4.81□□□□□ -1.64
BMP4P12644 MIR4489-201ENST00000578869 62 ntBASIC4.81□□□□□ -1.64
BMP4P12644 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.81□□□□□ -1.64
BMP4P12644 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.81□□□□□ -1.64
BMP4P12644 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.81□□□□□ -1.64
BMP4P12644 AL596275.2-206ENST00000641957 626 ntBASIC4.81□□□□□ -1.64
BMP4P12644 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BMP4P12644 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.81□□□□□ -1.64
BMP4P12644 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
BMP4P12644 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BMP4P12644 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.81□□□□□ -1.64
BMP4P12644 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.81□□□□□ -1.64
BMP4P12644 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BMP4P12644 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
BMP4P12644 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
BMP4P12644 AC233981.2-201ENST00000611524 1614 ntBASIC4.8□□□□□ -1.64
BMP4P12644 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.8□□□□□ -1.64
BMP4P12644 Y_RNA.217-201ENST00000364214 105 ntBASIC4.8□□□□□ -1.64
BMP4P12644 Y_RNA.218-201ENST00000364218 104 ntBASIC4.8□□□□□ -1.64
BMP4P12644 RNA5SP30-201ENST00000365552 115 ntBASIC4.8□□□□□ -1.64
BMP4P12644 RNU6-843P-201ENST00000384454 104 ntBASIC4.8□□□□□ -1.64
BMP4P12644 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.8□□□□□ -1.64
BMP4P12644 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.8□□□□□ -1.64
BMP4P12644 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.8□□□□□ -1.64
BMP4P12644 AC024067.1-201ENST00000426199 223 ntBASIC4.8□□□□□ -1.64
BMP4P12644 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.8□□□□□ -1.64
BMP4P12644 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.8□□□□□ -1.64
BMP4P12644 AC009296.1-201ENST00000443146 155 ntBASIC4.8□□□□□ -1.64
BMP4P12644 AL450023.1-201ENST00000450868 751 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms