Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 RNU6-898P-201ENST00000365627 104 ntBASIC3.65□□□□□ -1.83
PF4V1P10720 MIR195-201ENST00000385194 87 ntBASIC3.65□□□□□ -1.83
PF4V1P10720 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.65□□□□□ -1.83
PF4V1P10720 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.65□□□□□ -1.83
PF4V1P10720 RPS15AP6-201ENST00000420703 385 ntBASIC3.65□□□□□ -1.83
PF4V1P10720 AL645608.4-201ENST00000423619 154 ntBASIC3.65□□□□□ -1.83
PF4V1P10720 AL365400.1-201ENST00000431854 640 ntBASIC3.65□□□□□ -1.83
PF4V1P10720 AL359672.1-201ENST00000442302 409 ntBASIC3.65□□□□□ -1.83
PF4V1P10720 AC006026.2-201ENST00000457376 180 ntBASIC3.65□□□□□ -1.83
PF4V1P10720 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PF4V1P10720 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.65□□□□□ -1.83
PF4V1P10720 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.65□□□□□ -1.83
PF4V1P10720 MTCO1P35-201ENST00000515270 228 ntBASIC3.65□□□□□ -1.83
PF4V1P10720 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PF4V1P10720 AP004607.1-201ENST00000524456 203 ntBASIC3.65□□□□□ -1.83
PF4V1P10720 OR1M4P-201ENST00000589199 287 ntBASIC3.65□□□□□ -1.83
PF4V1P10720 AC024220.1-201ENST00000603675 484 ntBASIC3.65□□□□□ -1.83
PF4V1P10720 RNU6-85P-201ENST00000605989 107 ntBASIC3.65□□□□□ -1.83
PF4V1P10720 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.65□□□□□ -1.83
PF4V1P10720 uc_338.5-201ENST00000611839 155 ntBASIC3.65□□□□□ -1.83
PF4V1P10720 AC063943.3-201ENST00000615562 356 ntBASIC3.65□□□□□ -1.83
PF4V1P10720 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.65□□□□□ -1.83
PF4V1P10720 U3.53-201ENST00000628922 216 ntBASIC3.65□□□□□ -1.83
PF4V1P10720 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PF4V1P10720 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
PF4V1P10720 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
PF4V1P10720 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PF4V1P10720 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PF4V1P10720 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.64□□□□□ -1.83
PF4V1P10720 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PF4V1P10720 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.64□□□□□ -1.83
PF4V1P10720 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
PF4V1P10720 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.64□□□□□ -1.83
PF4V1P10720 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PF4V1P10720 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.64□□□□□ -1.83
PF4V1P10720 RNU6-1252P-201ENST00000363054 104 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 RNA5SP447-201ENST00000363749 119 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 SNORA70F-201ENST00000384142 135 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 MIR129-1-201ENST00000384972 72 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 RNU6-1009P-201ENST00000390996 107 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 RNU1-101P-201ENST00000391171 127 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 RNA5SP397-201ENST00000391323 118 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 VN1R36P-201ENST00000414936 291 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 NDUFB4P5-201ENST00000415445 361 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 AC016831.2-201ENST00000417179 352 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 AL365496.1-201ENST00000426885 215 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 RPS12P10-201ENST00000427031 377 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.64□□□□□ -1.83
PF4V1P10720 AC011998.1-201ENST00000433403 117 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 HIGD1AP2-201ENST00000446367 280 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.64□□□□□ -1.83
PF4V1P10720 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.64□□□□□ -1.83
PF4V1P10720 HMGB3P22-202ENST00000451823 572 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 RNU7-170P-201ENST00000459303 61 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 AC091951.2-201ENST00000500762 203 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 RNU6-875P-201ENST00000516488 106 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 Y_RNA.687-201ENST00000516558 91 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.64□□□□□ -1.83
PF4V1P10720 AC005668.1-201ENST00000571142 476 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.64□□□□□ -1.83
PF4V1P10720 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.64□□□□□ -1.83
PF4V1P10720 AC008121.1-201ENST00000603244 268 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 AL356218.2-201ENST00000605264 187 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 AC091979.2-201ENST00000607514 214 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 AC104260.1-201ENST00000616660 539 ntBASIC3.64□□□□□ -1.83
PF4V1P10720 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
PF4V1P10720 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PF4V1P10720 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.64□□□□□ -1.83
PF4V1P10720 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.64□□□□□ -1.83
PF4V1P10720 AC008669.1-201ENST00000565823 2178 ntBASIC3.63□□□□□ -1.83
PF4V1P10720 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.63□□□□□ -1.83
PF4V1P10720 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PF4V1P10720 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.63□□□□□ -1.83
PF4V1P10720 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.63□□□□□ -1.83
PF4V1P10720 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PF4V1P10720 AL158163.1-201ENST00000603915 1649 ntBASIC3.63□□□□□ -1.83
PF4V1P10720 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PF4V1P10720 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.63□□□□□ -1.83
PF4V1P10720 MFSD8-216ENST00000641147 4009 ntBASIC3.63□□□□□ -1.83
PF4V1P10720 RNU1-105P-201ENST00000363470 161 ntBASIC3.63□□□□□ -1.83
PF4V1P10720 Y_RNA.212-201ENST00000364177 102 ntBASIC3.63□□□□□ -1.83
PF4V1P10720 RN7SKP227-201ENST00000364445 330 ntBASIC3.63□□□□□ -1.83
PF4V1P10720 RNU6-214P-201ENST00000384130 107 ntBASIC3.63□□□□□ -1.83
PF4V1P10720 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.63□□□□□ -1.83
PF4V1P10720 ARL4AP5-201ENST00000404372 599 ntBASIC3.63□□□□□ -1.83
PF4V1P10720 AL356967.1-201ENST00000406305 431 ntBASIC3.63□□□□□ -1.83
PF4V1P10720 AC023141.4-201ENST00000412031 328 ntBASIC3.63□□□□□ -1.83
PF4V1P10720 AC009237.10-201ENST00000414112 510 ntBASIC3.63□□□□□ -1.83
PF4V1P10720 PDCL2P1-201ENST00000419302 352 ntBASIC3.63□□□□□ -1.83
PF4V1P10720 NCOR1P3-201ENST00000420479 303 ntBASIC3.63□□□□□ -1.83
PF4V1P10720 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.63□□□□□ -1.83
PF4V1P10720 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.63□□□□□ -1.83
PF4V1P10720 NIPA2P5-201ENST00000452282 464 ntBASIC3.63□□□□□ -1.83
PF4V1P10720 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.63□□□□□ -1.83
PF4V1P10720 snoU109.2-201ENST00000459316 135 ntBASIC3.63□□□□□ -1.83
PF4V1P10720 AC010469.1-201ENST00000463864 576 ntBASIC3.63□□□□□ -1.83
PF4V1P10720 RPL36AP41-201ENST00000493820 306 ntBASIC3.63□□□□□ -1.83
PF4V1P10720 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.63□□□□□ -1.83
PF4V1P10720 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.63□□□□□ -1.83
PF4V1P10720 RNU7-30P-201ENST00000516835 62 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms