Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL445433.1-201ENST00000457507 257 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 SNORD125-201ENST00000459538 96 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 RN7SL354P-201ENST00000469282 294 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 RPL12P20-201ENST00000475538 479 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 RN7SKP260-201ENST00000516907 149 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 RNU6-1073P-201ENST00000517182 106 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 AP006289.1-201ENST00000538089 277 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.75□□□□□ -1.65
PDGFAP04085 RPL23AP78-201ENST00000599928 470 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 AC090617.7-201ENST00000623952 126 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.75□□□□□ -1.65
PDGFAP04085 BMS1P21-201ENST00000634565 365 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 U6.99-201ENST00000637524 83 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFAP04085 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
PDGFAP04085 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFAP04085 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFAP04085 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFAP04085 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFAP04085 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.75□□□□□ -1.65
PDGFAP04085 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.75□□□□□ -1.65
PDGFAP04085 LINC01355-201ENST00000566551 5444 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFAP04085 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.75□□□□□ -1.65
PDGFAP04085 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDGFAP04085 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.74□□□□□ -1.65
PDGFAP04085 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
PDGFAP04085 RLIMP1-201ENST00000339626 1680 ntBASIC4.74□□□□□ -1.65
PDGFAP04085 AC008079.2-201ENST00000623543 20396 ntBASIC4.74□□□□□ -1.65
PDGFAP04085 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
PDGFAP04085 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PDGFAP04085 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
PDGFAP04085 RNU6-78P-201ENST00000362897 107 ntBASIC4.74□□□□□ -1.65
PDGFAP04085 Y_RNA.416-201ENST00000384014 113 ntBASIC4.74□□□□□ -1.65
PDGFAP04085 RNU6-72P-201ENST00000384285 79 ntBASIC4.74□□□□□ -1.65
PDGFAP04085 BTF3L4P2-201ENST00000392798 346 ntBASIC4.74□□□□□ -1.65
PDGFAP04085 RNU6-1203P-201ENST00000410703 110 ntBASIC4.74□□□□□ -1.65
PDGFAP04085 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.74□□□□□ -1.65
PDGFAP04085 SDAD1P3-201ENST00000427380 333 ntBASIC4.74□□□□□ -1.65
PDGFAP04085 RPL21P91-201ENST00000429231 479 ntBASIC4.74□□□□□ -1.65
PDGFAP04085 RPS29P10-201ENST00000439197 166 ntBASIC4.74□□□□□ -1.65
PDGFAP04085 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.74□□□□□ -1.65
PDGFAP04085 HMGN2P21-201ENST00000447764 270 ntBASIC4.74□□□□□ -1.65
PDGFAP04085 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.74□□□□□ -1.65
PDGFAP04085 AC073264.2-201ENST00000448886 166 ntBASIC4.74□□□□□ -1.65
PDGFAP04085 AL513124.1-201ENST00000450410 614 ntBASIC4.74□□□□□ -1.65
PDGFAP04085 snoU109.2-201ENST00000459316 135 ntBASIC4.74□□□□□ -1.65
PDGFAP04085 RNU7-87P-201ENST00000459343 62 ntBASIC4.74□□□□□ -1.65
PDGFAP04085 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.74□□□□□ -1.65
PDGFAP04085 HMGB3P17-201ENST00000504195 649 ntBASIC4.74□□□□□ -1.65
PDGFAP04085 SCARNA20.4-201ENST00000516969 131 ntBASIC4.74□□□□□ -1.65
PDGFAP04085 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.74□□□□□ -1.65
PDGFAP04085 MIR4782-201ENST00000577987 79 ntBASIC4.74□□□□□ -1.65
PDGFAP04085 AC073410.2-201ENST00000603240 332 ntBASIC4.74□□□□□ -1.65
PDGFAP04085 AL365434.2-201ENST00000607979 234 ntBASIC4.74□□□□□ -1.65
PDGFAP04085 AC083809.1-201ENST00000615051 472 ntBASIC4.74□□□□□ -1.65
PDGFAP04085 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.74□□□□□ -1.65
PDGFAP04085 MIR6758-201ENST00000620653 63 ntBASIC4.74□□□□□ -1.65
PDGFAP04085 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.74□□□□□ -1.65
PDGFAP04085 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.74□□□□□ -1.65
PDGFAP04085 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDGFAP04085 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDGFAP04085 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PDGFAP04085 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PDGFAP04085 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.74□□□□□ -1.65
PDGFAP04085 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.73□□□□□ -1.65
PDGFAP04085 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
PDGFAP04085 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDGFAP04085 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDGFAP04085 AC079741.1-201ENST00000321498 212 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 Y_RNA.20-201ENST00000362479 113 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 Y_RNA.84-201ENST00000363011 104 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 RNU6-200P-201ENST00000364743 107 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 Y_RNA.439-201ENST00000384119 94 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 RPL21P75-201ENST00000396599 483 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 RPL21P28-201ENST00000401418 483 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 RPS16P5-201ENST00000406501 404 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 AL590556.1-201ENST00000423231 483 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 AL591043.1-201ENST00000432461 424 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 AC004383.1-201ENST00000438135 289 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 RPL21P11-201ENST00000461458 483 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 RPL21P39-201ENST00000463605 483 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 AC034236.1-201ENST00000469891 373 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 AC087190.1-201ENST00000484462 480 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 AC107032.1-201ENST00000485945 480 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 AC132942.1-201ENST00000486753 483 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 AC093591.1-201ENST00000491435 481 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 RPL21P16-201ENST00000495531 483 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 COX6B1P5-201ENST00000509843 249 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.73□□□□□ -1.65
PDGFAP04085 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDGFAP04085 SNORA31.6-201ENST00000516241 130 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 RNA5SP360-201ENST00000516555 118 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 SNORA31.18-201ENST00000517043 134 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 RNU6-111P-201ENST00000517179 105 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 IGKV2-23-201ENST00000518729 323 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 AC007458.1-201ENST00000542812 373 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 AC093023.1-201ENST00000547375 507 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.73□□□□□ -1.65
PDGFAP04085 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms