Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RPL23AP41-201ENST00000484754 458 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 RPS27P26-201ENST00000494583 239 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 HSPD1P15-201ENST00000505573 1122 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 Y_RNA.655-201ENST00000515919 96 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 Y_RNA.672-201ENST00000516289 104 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 RNU6-64P-201ENST00000517119 105 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.72□□□□□ -1.97
MT-ND1P03886 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.72□□□□□ -1.97
MT-ND1P03886 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.72□□□□□ -1.97
MT-ND1P03886 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.72□□□□□ -1.97
MT-ND1P03886 TRAV28-201ENST00000557548 323 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 AC005951.2-201ENST00000576282 495 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 AC012213.3-201ENST00000577199 777 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.72□□□□□ -1.97
MT-ND1P03886 AL161729.4-201ENST00000604650 476 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 AL627309.6-201ENST00000606857 840 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.72□□□□□ -1.97
MT-ND1P03886 AC004908.2-201ENST00000609090 574 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.72□□□□□ -1.97
MT-ND1P03886 AP001506.1-201ENST00000615444 211 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 AC108479.2-201ENST00000617314 601 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
MT-ND1P03886 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
MT-ND1P03886 GNG5P1-201ENST00000255500 204 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 RNA5SP72-201ENST00000364442 117 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 RNY3P13-201ENST00000365542 102 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
MT-ND1P03886 SNORA54-201ENST00000384281 123 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 RPS3AP36-201ENST00000398190 775 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.71□□□□□ -1.98
MT-ND1P03886 RPL5P18-201ENST00000406671 891 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 RNU6-193P-201ENST00000410977 107 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.71□□□□□ -1.98
MT-ND1P03886 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.71□□□□□ -1.98
MT-ND1P03886 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.71□□□□□ -1.98
MT-ND1P03886 AL158156.1-201ENST00000422509 473 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 AC007283.2-201ENST00000424739 197 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 AC092047.1-201ENST00000424997 240 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.71□□□□□ -1.98
MT-ND1P03886 AC104850.1-201ENST00000435940 476 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.71□□□□□ -1.98
MT-ND1P03886 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.71□□□□□ -1.98
MT-ND1P03886 AC093156.1-201ENST00000440382 670 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 AC005094.1-201ENST00000440420 368 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 RNU7-59P-201ENST00000459101 61 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 snoU109.1-201ENST00000459339 135 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.71□□□□□ -1.98
MT-ND1P03886 RPL23AP11-201ENST00000475260 469 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 RN7SL297P-201ENST00000483161 293 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.71□□□□□ -1.98
MT-ND1P03886 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 AC010587.1-201ENST00000505809 469 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 AC114797.1-201ENST00000514003 728 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 SNORA18.6-201ENST00000516792 115 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.71□□□□□ -1.98
MT-ND1P03886 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.71□□□□□ -1.98
MT-ND1P03886 DEFB108A-201ENST00000530110 222 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.71□□□□□ -1.98
MT-ND1P03886 AC107016.2-201ENST00000547968 190 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.71□□□□□ -1.98
MT-ND1P03886 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.71□□□□□ -1.98
MT-ND1P03886 AC010653.1-201ENST00000571108 881 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 AC137800.2-201ENST00000574375 120 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 MIR5004-201ENST00000579078 107 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.71□□□□□ -1.98
MT-ND1P03886 KC877982.1-201ENST00000602313 470 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 AL035413.2-201ENST00000604801 525 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 AC019159.1-201ENST00000605094 187 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 AP000860.1-201ENST00000605250 559 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 AC121334.2-201ENST00000605387 271 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 AL451064.1-201ENST00000607718 471 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 AC103710.2-201ENST00000609912 942 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 Z99129.1-201ENST00000612510 255 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 AC008498.1-201ENST00000613012 531 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 AC110994.2-201ENST00000635481 492 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 AC092447.7-201ENST00000422212 1621 ntBASIC2.71□□□□□ -1.98
MT-ND1P03886 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
MT-ND1P03886 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
MT-ND1P03886 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
MT-ND1P03886 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
MT-ND1P03886 RNU6-223P-201ENST00000362830 107 ntBASIC2.7□□□□□ -1.98
MT-ND1P03886 MIR767-201ENST00000390228 109 ntBASIC2.7□□□□□ -1.98
MT-ND1P03886 AL109755.1-201ENST00000401791 649 ntBASIC2.7□□□□□ -1.98
MT-ND1P03886 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.7□□□□□ -1.98
MT-ND1P03886 AL663109.1-201ENST00000411498 844 ntBASIC2.7□□□□□ -1.98
MT-ND1P03886 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.7□□□□□ -1.98
MT-ND1P03886 AL513477.1-202ENST00000417061 214 ntBASIC2.7□□□□□ -1.98
MT-ND1P03886 BX295541.1-201ENST00000417774 250 ntBASIC2.7□□□□□ -1.98
MT-ND1P03886 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.7□□□□□ -1.98
MT-ND1P03886 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.7□□□□□ -1.98
MT-ND1P03886 ISCA1P6-201ENST00000427740 390 ntBASIC2.7□□□□□ -1.98
MT-ND1P03886 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.7□□□□□ -1.98
MT-ND1P03886 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.7□□□□□ -1.98
MT-ND1P03886 BNIP3P2-201ENST00000441221 577 ntBASIC2.7□□□□□ -1.98
MT-ND1P03886 PIGFP3-201ENST00000441918 722 ntBASIC2.7□□□□□ -1.98
MT-ND1P03886 MTATP6P30-201ENST00000443540 664 ntBASIC2.7□□□□□ -1.98
MT-ND1P03886 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.7□□□□□ -1.98
MT-ND1P03886 MRPL50P4-201ENST00000446432 475 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms