Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.72□□□□□ -1.81
TOP3BO95985 AC090337.1-201ENST00000579651 2074 ntBASIC3.72□□□□□ -1.81
TOP3BO95985 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TOP3BO95985 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TOP3BO95985 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TOP3BO95985 AL021368.2-201ENST00000606125 5352 ntBASIC3.71□□□□□ -1.81
TOP3BO95985 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TOP3BO95985 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.71□□□□□ -1.82
TOP3BO95985 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TOP3BO95985 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TOP3BO95985 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
TOP3BO95985 RNU6-996P-201ENST00000365438 107 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.71□□□□□ -1.82
TOP3BO95985 Y_RNA.474-201ENST00000384341 102 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 SNORA48.5-201ENST00000391143 135 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 AC137499.1-201ENST00000427602 88 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.71□□□□□ -1.82
TOP3BO95985 MRPS18BP2-201ENST00000434310 759 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
TOP3BO95985 AL138799.3-201ENST00000438968 350 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.71□□□□□ -1.82
TOP3BO95985 DDX3P2-201ENST00000446138 111 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 ANP32BP2-201ENST00000454525 545 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 Y_RNA.632-201ENST00000459189 102 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 snoU13.3-201ENST00000459441 104 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 HMGN2P26-201ENST00000463169 339 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 MRPS17P3-201ENST00000465453 385 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 RPS27AP1-201ENST00000475545 471 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 AL163973.1-201ENST00000484753 577 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.71□□□□□ -1.82
TOP3BO95985 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.71□□□□□ -1.82
TOP3BO95985 AC021146.1-201ENST00000511202 716 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 SNORA70.14-201ENST00000516205 110 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 RNU6-327P-201ENST00000516270 127 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 Vault.1-201ENST00000516474 102 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.71□□□□□ -1.82
TOP3BO95985 CR383656.7-201ENST00000548164 174 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.71□□□□□ -1.82
TOP3BO95985 PSMA3P-201ENST00000555485 635 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.71□□□□□ -1.82
TOP3BO95985 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.71□□□□□ -1.82
TOP3BO95985 MIR4742-201ENST00000581069 85 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.71□□□□□ -1.82
TOP3BO95985 AL031176.1-201ENST00000604554 466 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 IGHV3-29-201ENST00000604817 344 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 AC113139.1-201ENST00000605049 239 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 AL159972.1-201ENST00000625150 448 ntBASIC3.71□□□□□ -1.82
TOP3BO95985 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.71□□□□□ -1.82
TOP3BO95985 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TOP3BO95985 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TOP3BO95985 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.71□□□□□ -1.82
TOP3BO95985 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
TOP3BO95985 Y_RNA.132-201ENST00000363421 102 ntBASIC3.7□□□□□ -1.82
TOP3BO95985 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
TOP3BO95985 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.7□□□□□ -1.82
TOP3BO95985 AL645937.1-202ENST00000421799 937 ntBASIC3.7□□□□□ -1.82
TOP3BO95985 AC005300.1-201ENST00000428401 373 ntBASIC3.7□□□□□ -1.82
TOP3BO95985 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.7□□□□□ -1.82
TOP3BO95985 AC073415.1-201ENST00000449240 153 ntBASIC3.7□□□□□ -1.82
TOP3BO95985 MTND1P9-201ENST00000453775 944 ntBASIC3.7□□□□□ -1.82
TOP3BO95985 RPL21P10-201ENST00000463521 490 ntBASIC3.7□□□□□ -1.82
TOP3BO95985 RN7SL807P-201ENST00000470923 297 ntBASIC3.7□□□□□ -1.82
TOP3BO95985 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.7□□□□□ -1.82
TOP3BO95985 RNU4-49P-201ENST00000516080 140 ntBASIC3.7□□□□□ -1.82
TOP3BO95985 Y_RNA.691-201ENST00000516611 103 ntBASIC3.7□□□□□ -1.82
TOP3BO95985 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.7□□□□□ -1.82
TOP3BO95985 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.7□□□□□ -1.82
TOP3BO95985 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.7□□□□□ -1.82
TOP3BO95985 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.7□□□□□ -1.82
TOP3BO95985 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.7□□□□□ -1.82
TOP3BO95985 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.7□□□□□ -1.82
TOP3BO95985 MIR4738-201ENST00000579134 87 ntBASIC3.7□□□□□ -1.82
TOP3BO95985 KLKP1-201ENST00000595979 403 ntBASIC3.7□□□□□ -1.82
TOP3BO95985 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.7□□□□□ -1.82
TOP3BO95985 AC007656.2-201ENST00000624902 4547 ntBASIC3.7□□□□□ -1.82
TOP3BO95985 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
TOP3BO95985 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.7□□□□□ -1.82
TOP3BO95985 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.7□□□□□ -1.82
TOP3BO95985 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TOP3BO95985 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TOP3BO95985 TNPO1P3-201ENST00000436471 2662 ntBASIC3.69□□□□□ -1.82
TOP3BO95985 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TOP3BO95985 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
TOP3BO95985 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TOP3BO95985 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.69□□□□□ -1.82
TOP3BO95985 AC116096.1-201ENST00000566804 2314 ntBASIC3.69□□□□□ -1.82
TOP3BO95985 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
TOP3BO95985 RNU6-1078P-201ENST00000364522 103 ntBASIC3.69□□□□□ -1.82
TOP3BO95985 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
TOP3BO95985 RNU6-837P-201ENST00000391056 108 ntBASIC3.69□□□□□ -1.82
TOP3BO95985 HMGN1P24-201ENST00000412282 298 ntBASIC3.69□□□□□ -1.82
TOP3BO95985 NDUFB4P5-201ENST00000415445 361 ntBASIC3.69□□□□□ -1.82
TOP3BO95985 MTCYBP8-201ENST00000422855 651 ntBASIC3.69□□□□□ -1.82
TOP3BO95985 DUTP6-201ENST00000425573 462 ntBASIC3.69□□□□□ -1.82
TOP3BO95985 HMGB1P18-201ENST00000438801 619 ntBASIC3.69□□□□□ -1.82
TOP3BO95985 RAC1P7-201ENST00000445367 377 ntBASIC3.69□□□□□ -1.82
TOP3BO95985 HMGB3P30-201ENST00000457863 606 ntBASIC3.69□□□□□ -1.82
TOP3BO95985 GMFBP1-201ENST00000467831 427 ntBASIC3.69□□□□□ -1.82
TOP3BO95985 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.69□□□□□ -1.82
TOP3BO95985 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms