Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM13O60858 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM13O60858 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM13O60858 RNU4-50P-201ENST00000364361 141 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM13O60858 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM13O60858 RNU6-339P-201ENST00000384310 107 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 RNU6-378P-201ENST00000384324 107 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 RNU6-393P-201ENST00000384475 107 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 MT-TC-201ENST00000387405 66 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TRIM13O60858 MIR708-201ENST00000390708 88 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 RNA5SP397-201ENST00000391323 118 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 MIR298-201ENST00000401212 88 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 MIR1250-201ENST00000408098 113 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 UBE2FP1-201ENST00000416536 447 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 DNAJC19P7-201ENST00000428811 344 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM13O60858 PSMD10P3-201ENST00000437000 448 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM13O60858 AL353691.1-201ENST00000451332 387 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 RPL17P19-201ENST00000489069 552 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 RN7SL808P-201ENST00000496066 299 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM13O60858 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.27□□□□□ -1.73
TRIM13O60858 RNU2-69P-201ENST00000516061 100 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 RNU6-798P-201ENST00000516912 103 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM13O60858 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM13O60858 AP001922.4-201ENST00000526967 290 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 AC109446.1-201ENST00000566172 220 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 AC006600.1-201ENST00000572529 153 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 MIR4293-201ENST00000584305 78 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 AC010620.2-201ENST00000600135 313 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM13O60858 AL139395.1-201ENST00000603662 160 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 AP001282.2-201ENST00000616149 309 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 AC008785.1-201ENST00000624475 456 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM13O60858 EIF2AP4-201ENST00000424793 1781 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 AL359893.1-201ENST00000447628 1580 ntBASIC4.27□□□□□ -1.73
TRIM13O60858 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM13O60858 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
TRIM13O60858 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM13O60858 NOL8P1-201ENST00000508336 3529 ntBASIC4.26□□□□□ -1.73
TRIM13O60858 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM13O60858 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM13O60858 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM13O60858 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM13O60858 AC016588.2-201ENST00000632484 3021 ntBASIC4.26□□□□□ -1.73
TRIM13O60858 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM13O60858 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TRIM13O60858 SNORD51-201ENST00000384320 80 ntBASIC4.26□□□□□ -1.73
TRIM13O60858 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM13O60858 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM13O60858 RNU6-1156P-201ENST00000410365 100 ntBASIC4.26□□□□□ -1.73
TRIM13O60858 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM13O60858 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM13O60858 RPS12P5-201ENST00000423449 371 ntBASIC4.26□□□□□ -1.73
TRIM13O60858 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM13O60858 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM13O60858 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM13O60858 RPL36AP13-201ENST00000457490 317 ntBASIC4.26□□□□□ -1.73
TRIM13O60858 SNORD97-201ENST00000459187 142 ntBASIC4.26□□□□□ -1.73
TRIM13O60858 RPL35AP15-201ENST00000468042 339 ntBASIC4.26□□□□□ -1.73
TRIM13O60858 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM13O60858 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM13O60858 RNU6-27P-201ENST00000516146 107 ntBASIC4.26□□□□□ -1.73
TRIM13O60858 RNU4-71P-201ENST00000516258 113 ntBASIC4.26□□□□□ -1.73
TRIM13O60858 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM13O60858 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM13O60858 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM13O60858 MIR4646-201ENST00000580775 63 ntBASIC4.26□□□□□ -1.73
TRIM13O60858 AC067852.4-201ENST00000590314 478 ntBASIC4.26□□□□□ -1.73
TRIM13O60858 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM13O60858 AC079587.1-201ENST00000603846 277 ntBASIC4.26□□□□□ -1.73
TRIM13O60858 AL590099.1-201ENST00000615276 138 ntBASIC4.26□□□□□ -1.73
TRIM13O60858 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM13O60858 AL159153.1-201ENST00000619688 317 ntBASIC4.26□□□□□ -1.73
TRIM13O60858 AC068870.2-201ENST00000620635 389 ntBASIC4.26□□□□□ -1.73
TRIM13O60858 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM13O60858 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TRIM13O60858 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM13O60858 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM13O60858 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
TRIM13O60858 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM13O60858 EXOC5P1-201ENST00000510543 1969 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM13O60858 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM13O60858 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM13O60858 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM13O60858 Y_RNA.105-201ENST00000363182 111 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 RNU6-214P-201ENST00000384130 107 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 RNU6-48P-201ENST00000384161 107 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 RNU6-434P-201ENST00000384376 107 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 SNORA51.11-201ENST00000384442 131 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 AL109941.1-201ENST00000401925 229 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 AL645733.1-201ENST00000402250 217 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 RNU6-1140P-201ENST00000410517 106 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 RNA5SP107-201ENST00000411358 122 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms