Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
ZIC3O60481 MIR490-201ENST00000384865 128 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 MIR7-3-201ENST00000384898 110 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 MIR183-201ENST00000384958 110 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
ZIC3O60481 SNORD17-201ENST00000390930 237 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
ZIC3O60481 AL138878.1-201ENST00000405131 347 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 RNU2-37P-201ENST00000410695 177 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 AC092809.3-201ENST00000415453 231 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 AC017083.1-201ENST00000428093 483 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 YME1L1P1-201ENST00000429435 297 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 AL356867.1-201ENST00000429623 299 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 AL159987.2-201ENST00000432754 307 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 AL353572.1-201ENST00000442490 417 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 PRDX3P3-201ENST00000447765 522 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 ELOCP23-201ENST00000452014 332 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.16□□□□□ -1.9
ZIC3O60481 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.16□□□□□ -1.9
ZIC3O60481 RPL23AP62-201ENST00000463396 453 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 FCF1P3-201ENST00000496394 590 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 AC117522.3-201ENST00000507974 584 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 AC104806.1-201ENST00000508720 308 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 RNU6-1256P-201ENST00000516539 103 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 RNU6-677P-201ENST00000516914 101 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.16□□□□□ -1.9
ZIC3O60481 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.16□□□□□ -1.9
ZIC3O60481 AC118273.2-201ENST00000532092 465 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.16□□□□□ -1.9
ZIC3O60481 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.16□□□□□ -1.9
ZIC3O60481 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.16□□□□□ -1.9
ZIC3O60481 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.16□□□□□ -1.9
ZIC3O60481 AC026333.2-201ENST00000542164 106 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.16□□□□□ -1.9
ZIC3O60481 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.16□□□□□ -1.9
ZIC3O60481 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.16□□□□□ -1.9
ZIC3O60481 AC013553.2-201ENST00000604244 589 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 AC034102.8-201ENST00000615146 484 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 U6.105-201ENST00000637379 88 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ZIC3O60481 CEP170P1-201ENST00000502249 4587 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 MFSD8-233ENST00000641482 4860 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.16□□□□□ -1.9
ZIC3O60481 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ZIC3O60481 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
ZIC3O60481 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
ZIC3O60481 RNU6-50P-201ENST00000362356 103 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 RNU4-35P-201ENST00000362588 141 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 Y_RNA.303-201ENST00000364998 94 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 DEFB109C-201ENST00000382575 264 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 DEFB109B-201ENST00000382656 264 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 RNU6-190P-201ENST00000384154 102 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 U3.42-201ENST00000408746 214 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 AC068533.1-201ENST00000418542 415 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 AL139413.1-201ENST00000421309 217 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.15□□□□□ -1.91
ZIC3O60481 RPL7P46-201ENST00000425129 740 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 FABP5P13-201ENST00000452144 328 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.15□□□□□ -1.91
ZIC3O60481 HMGN2P16-201ENST00000456802 261 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.15□□□□□ -1.91
ZIC3O60481 RNU6-953P-201ENST00000459154 107 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 RPS20P22-201ENST00000473700 357 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 EIF4EP3-201ENST00000498782 656 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.15□□□□□ -1.91
ZIC3O60481 RNU6-123P-201ENST00000516163 102 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 Y_RNA.689-201ENST00000516589 107 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 SNORD60.2-201ENST00000516883 86 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 IGKV2-26-201ENST00000518305 343 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.15□□□□□ -1.91
ZIC3O60481 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.15□□□□□ -1.91
ZIC3O60481 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.15□□□□□ -1.91
ZIC3O60481 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.15□□□□□ -1.91
ZIC3O60481 AP005205.1-201ENST00000563503 508 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 AC015917.1-201ENST00000579654 510 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.15□□□□□ -1.91
ZIC3O60481 MIR548S-201ENST00000581352 82 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 AC060780.3-201ENST00000589464 80 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 AC002545.1-201ENST00000592511 181 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 NRBF2P5-201ENST00000603087 788 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 AC024220.1-201ENST00000603675 484 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.15□□□□□ -1.91
ZIC3O60481 AC008945.2-201ENST00000606056 604 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 AC130324.3-201ENST00000614165 542 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
ZIC3O60481 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
ZIC3O60481 AL133383.2-201ENST00000622958 2336 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 AC008568.2-201ENST00000623862 2313 ntBASIC3.15□□□□□ -1.91
ZIC3O60481 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ZIC3O60481 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
ZIC3O60481 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ZIC3O60481 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ZIC3O60481 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
ZIC3O60481 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ZIC3O60481 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
ZIC3O60481 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
ZIC3O60481 RNU6-288P-201ENST00000363690 104 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 RNA5SP50-201ENST00000363731 107 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms