Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM38O00635 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM38O00635 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.83□□□□□ -1.8
TRIM38O00635 AC005951.2-201ENST00000576282 495 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 MIR3167-201ENST00000579623 85 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM38O00635 AL161756.2-201ENST00000604597 246 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 MIR98-201ENST00000606724 119 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TRIM38O00635 AC012314.7-201ENST00000619693 93 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 MIR1302-1-201ENST00000637932 143 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM38O00635 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM38O00635 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM38O00635 MAPK10-372ENST00000641954 3413 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM38O00635 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM38O00635 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM38O00635 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM38O00635 OR4G2P-202ENST00000641004 1759 ntBASIC3.82□□□□□ -1.8
TRIM38O00635 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM38O00635 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
TRIM38O00635 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
TRIM38O00635 RNU6-451P-201ENST00000362921 107 ntBASIC3.82□□□□□ -1.8
TRIM38O00635 Y_RNA.166-201ENST00000363730 102 ntBASIC3.82□□□□□ -1.8
TRIM38O00635 RNY3P3-201ENST00000363816 102 ntBASIC3.82□□□□□ -1.8
TRIM38O00635 U1.1-201ENST00000384101 164 ntBASIC3.82□□□□□ -1.8
TRIM38O00635 AL122016.1-201ENST00000403365 367 ntBASIC3.82□□□□□ -1.8
TRIM38O00635 Z98941.1-201ENST00000407764 100 ntBASIC3.82□□□□□ -1.8
TRIM38O00635 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM38O00635 YPEL5P1-201ENST00000419731 367 ntBASIC3.82□□□□□ -1.8
TRIM38O00635 SNRPEP10-201ENST00000420249 274 ntBASIC3.82□□□□□ -1.8
TRIM38O00635 AC007283.2-201ENST00000424739 197 ntBASIC3.82□□□□□ -1.8
TRIM38O00635 MRPL50P4-201ENST00000446432 475 ntBASIC3.82□□□□□ -1.8
TRIM38O00635 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.82□□□□□ -1.8
TRIM38O00635 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM38O00635 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM38O00635 CEACAMP4-201ENST00000457676 421 ntBASIC3.82□□□□□ -1.8
TRIM38O00635 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM38O00635 NDUFB4P9-201ENST00000511646 388 ntBASIC3.82□□□□□ -1.8
TRIM38O00635 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.82□□□□□ -1.8
TRIM38O00635 RNU6-390P-201ENST00000516259 103 ntBASIC3.82□□□□□ -1.8
TRIM38O00635 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM38O00635 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM38O00635 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.82□□□□□ -1.8
TRIM38O00635 SYF2P1-201ENST00000550658 413 ntBASIC3.82□□□□□ -1.8
TRIM38O00635 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.82□□□□□ -1.8
TRIM38O00635 AC037471.2-201ENST00000564941 598 ntBASIC3.82□□□□□ -1.8
TRIM38O00635 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM38O00635 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM38O00635 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM38O00635 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM38O00635 AC018638.8-201ENST00000588755 281 ntBASIC3.82□□□□□ -1.8
TRIM38O00635 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM38O00635 AC019176.2-201ENST00000611579 315 ntBASIC3.82□□□□□ -1.8
TRIM38O00635 AL391261.4-201ENST00000616012 481 ntBASIC3.82□□□□□ -1.8
TRIM38O00635 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM38O00635 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM38O00635 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
TRIM38O00635 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM38O00635 AC066616.2-201ENST00000559334 1481 ntBASIC3.81□□□□□ -1.8
TRIM38O00635 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM38O00635 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM38O00635 RNU6-108P-201ENST00000365558 107 ntBASIC3.81□□□□□ -1.8
TRIM38O00635 RNU5E-6P-201ENST00000365574 115 ntBASIC3.81□□□□□ -1.8
TRIM38O00635 HLFP1-201ENST00000402375 499 ntBASIC3.81□□□□□ -1.8
TRIM38O00635 U3.42-201ENST00000408746 214 ntBASIC3.81□□□□□ -1.8
TRIM38O00635 RAC1P6-201ENST00000423911 575 ntBASIC3.81□□□□□ -1.8
TRIM38O00635 OR2AS1P-201ENST00000427827 319 ntBASIC3.81□□□□□ -1.8
TRIM38O00635 MED13P1-201ENST00000428342 171 ntBASIC3.81□□□□□ -1.8
TRIM38O00635 RPL23AP83-201ENST00000434984 473 ntBASIC3.81□□□□□ -1.8
TRIM38O00635 RPL36AP6-201ENST00000435770 321 ntBASIC3.81□□□□□ -1.8
TRIM38O00635 AC079781.2-201ENST00000446424 169 ntBASIC3.81□□□□□ -1.8
TRIM38O00635 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM38O00635 RPS20P22-201ENST00000473700 357 ntBASIC3.81□□□□□ -1.8
TRIM38O00635 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM38O00635 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM38O00635 RNU6-1092P-201ENST00000516955 87 ntBASIC3.81□□□□□ -1.8
TRIM38O00635 RN7SKP258-201ENST00000517151 304 ntBASIC3.81□□□□□ -1.8
TRIM38O00635 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM38O00635 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM38O00635 AC007991.1-201ENST00000522680 631 ntBASIC3.81□□□□□ -1.8
TRIM38O00635 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM38O00635 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM38O00635 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM38O00635 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM38O00635 AC011611.1-201ENST00000552179 197 ntBASIC3.81□□□□□ -1.8
TRIM38O00635 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.81□□□□□ -1.8
TRIM38O00635 RPL21P12-201ENST00000559810 515 ntBASIC3.81□□□□□ -1.8
TRIM38O00635 AL845331.3-202ENST00000562856 261 ntBASIC3.81□□□□□ -1.8
TRIM38O00635 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM38O00635 AL162413.1-201ENST00000603198 110 ntBASIC3.81□□□□□ -1.8
TRIM38O00635 SRGNP1-201ENST00000603392 451 ntBASIC3.81□□□□□ -1.8
TRIM38O00635 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM38O00635 AC090132.2-201ENST00000615881 347 ntBASIC3.81□□□□□ -1.8
TRIM38O00635 AC084757.4-201ENST00000616350 526 ntBASIC3.81□□□□□ -1.8
TRIM38O00635 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM38O00635 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM38O00635 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM38O00635 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms