Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.63□□□□□ -1.51
RCCD1A6NED2 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RCCD1A6NED2 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.62□□□□□ -1.51
RCCD1A6NED2 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RCCD1A6NED2 AL672167.1-204ENST00000641875 3017 ntBASIC5.62□□□□□ -1.51
RCCD1A6NED2 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RCCD1A6NED2 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RCCD1A6NED2 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.62□□□□□ -1.51
RCCD1A6NED2 U3.32-201ENST00000408116 212 ntBASIC5.62□□□□□ -1.51
RCCD1A6NED2 ELOCP19-201ENST00000411919 318 ntBASIC5.62□□□□□ -1.51
RCCD1A6NED2 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.62□□□□□ -1.51
RCCD1A6NED2 CYP4F29P-201ENST00000420685 446 ntBASIC5.62□□□□□ -1.51
RCCD1A6NED2 AC007919.1-201ENST00000429380 217 ntBASIC5.62□□□□□ -1.51
RCCD1A6NED2 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.62□□□□□ -1.51
RCCD1A6NED2 IFNA11P-201ENST00000446352 526 ntBASIC5.62□□□□□ -1.51
RCCD1A6NED2 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.62□□□□□ -1.51
RCCD1A6NED2 AC009963.2-201ENST00000453431 138 ntBASIC5.62□□□□□ -1.51
RCCD1A6NED2 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.62□□□□□ -1.51
RCCD1A6NED2 RPS27P26-201ENST00000494583 239 ntBASIC5.62□□□□□ -1.51
RCCD1A6NED2 RNA5SP272-201ENST00000516095 111 ntBASIC5.62□□□□□ -1.51
RCCD1A6NED2 AC016256.1-201ENST00000547971 354 ntBASIC5.62□□□□□ -1.51
RCCD1A6NED2 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.62□□□□□ -1.51
RCCD1A6NED2 IGBP1P1-201ENST00000554337 1009 ntBASIC5.62□□□□□ -1.51
RCCD1A6NED2 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.62□□□□□ -1.51
RCCD1A6NED2 UBL5P4-201ENST00000562584 236 ntBASIC5.62□□□□□ -1.51
RCCD1A6NED2 AC008521.2-201ENST00000591021 259 ntBASIC5.62□□□□□ -1.51
RCCD1A6NED2 AC105254.2-201ENST00000603636 436 ntBASIC5.62□□□□□ -1.51
RCCD1A6NED2 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RCCD1A6NED2 AC132068.1-201ENST00000623805 459 ntBASIC5.62□□□□□ -1.51
RCCD1A6NED2 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.62□□□□□ -1.51
RCCD1A6NED2 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RCCD1A6NED2 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RCCD1A6NED2 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RCCD1A6NED2 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RCCD1A6NED2 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RCCD1A6NED2 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RCCD1A6NED2 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.61□□□□□ -1.51
RCCD1A6NED2 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.61□□□□□ -1.51
RCCD1A6NED2 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
RCCD1A6NED2 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
RCCD1A6NED2 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
RCCD1A6NED2 AL121839.2-201ENST00000565058 6943 ntBASIC5.61□□□□□ -1.51
RCCD1A6NED2 Y_RNA.182-201ENST00000363880 111 ntBASIC5.61□□□□□ -1.51
RCCD1A6NED2 RN7SKP186-201ENST00000365371 303 ntBASIC5.61□□□□□ -1.51
RCCD1A6NED2 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
RCCD1A6NED2 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RCCD1A6NED2 AL391361.1-201ENST00000405580 489 ntBASIC5.61□□□□□ -1.51
RCCD1A6NED2 RNU2-68P-201ENST00000410878 191 ntBASIC5.61□□□□□ -1.51
RCCD1A6NED2 RNU6-1245P-201ENST00000411130 106 ntBASIC5.61□□□□□ -1.51
RCCD1A6NED2 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RCCD1A6NED2 TPT1P12-201ENST00000448968 492 ntBASIC5.61□□□□□ -1.51
RCCD1A6NED2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.61□□□□□ -1.51
RCCD1A6NED2 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.61□□□□□ -1.51
RCCD1A6NED2 RN7SL273P-201ENST00000481561 299 ntBASIC5.61□□□□□ -1.51
RCCD1A6NED2 RNU6-191P-201ENST00000516295 94 ntBASIC5.61□□□□□ -1.51
RCCD1A6NED2 SNORA43.2-201ENST00000516652 128 ntBASIC5.61□□□□□ -1.51
RCCD1A6NED2 SCARNA16.4-201ENST00000516956 187 ntBASIC5.61□□□□□ -1.51
RCCD1A6NED2 RNA5SP291-201ENST00000517222 105 ntBASIC5.61□□□□□ -1.51
RCCD1A6NED2 RNA5SP373-201ENST00000517271 95 ntBASIC5.61□□□□□ -1.51
RCCD1A6NED2 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.61□□□□□ -1.51
RCCD1A6NED2 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RCCD1A6NED2 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.61□□□□□ -1.51
RCCD1A6NED2 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.61□□□□□ -1.51
RCCD1A6NED2 AC024153.1-201ENST00000603103 365 ntBASIC5.61□□□□□ -1.51
RCCD1A6NED2 AL109809.4-201ENST00000603520 2185 ntBASIC5.61□□□□□ -1.51
RCCD1A6NED2 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.61□□□□□ -1.51
RCCD1A6NED2 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RCCD1A6NED2 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RCCD1A6NED2 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RCCD1A6NED2 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.61□□□□□ -1.51
RCCD1A6NED2 OR13C1P-202ENST00000641378 2919 ntBASIC5.61□□□□□ -1.51
RCCD1A6NED2 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.6□□□□□ -1.51
RCCD1A6NED2 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RCCD1A6NED2 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RCCD1A6NED2 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.6□□□□□ -1.51
RCCD1A6NED2 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RCCD1A6NED2 SMG1P6-201ENST00000532337 2930 ntBASIC5.6□□□□□ -1.51
RCCD1A6NED2 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RCCD1A6NED2 FTLP6-201ENST00000355274 422 ntBASIC5.6□□□□□ -1.51
RCCD1A6NED2 MIR133B-201ENST00000362210 119 ntBASIC5.6□□□□□ -1.51
RCCD1A6NED2 RN7SKP153-201ENST00000365026 316 ntBASIC5.6□□□□□ -1.51
RCCD1A6NED2 U8.10-201ENST00000384260 133 ntBASIC5.6□□□□□ -1.51
RCCD1A6NED2 RNU6-239P-201ENST00000390990 99 ntBASIC5.6□□□□□ -1.51
RCCD1A6NED2 AL357075.1-201ENST00000404107 726 ntBASIC5.6□□□□□ -1.51
RCCD1A6NED2 MTHFD2P2-201ENST00000407725 247 ntBASIC5.6□□□□□ -1.51
RCCD1A6NED2 AC104333.2-201ENST00000422630 192 ntBASIC5.6□□□□□ -1.51
RCCD1A6NED2 NDUFB4P7-201ENST00000423198 363 ntBASIC5.6□□□□□ -1.51
RCCD1A6NED2 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.6□□□□□ -1.51
RCCD1A6NED2 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.6□□□□□ -1.51
RCCD1A6NED2 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.6□□□□□ -1.51
RCCD1A6NED2 AC020890.1-201ENST00000491837 504 ntBASIC5.6□□□□□ -1.51
RCCD1A6NED2 RNU6-1333P-201ENST00000516162 93 ntBASIC5.6□□□□□ -1.51
RCCD1A6NED2 RNU6-58P-201ENST00000517143 103 ntBASIC5.6□□□□□ -1.51
RCCD1A6NED2 AC107016.1-201ENST00000550463 337 ntBASIC5.6□□□□□ -1.51
RCCD1A6NED2 CU639417.4-201ENST00000623928 207 ntBASIC5.6□□□□□ -1.51
RCCD1A6NED2 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.6□□□□□ -1.51
RCCD1A6NED2 AC093535.2-201ENST00000624769 2326 ntBASIC5.6□□□□□ -1.51
RCCD1A6NED2 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.6□□□□□ -1.51
RCCD1A6NED2 AC092593.1-201ENST00000515413 1815 ntBASIC5.6□□□□□ -1.51
RCCD1A6NED2 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms