Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 DEFB108F-201ENST00000344638 222 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 Y_RNA.255-201ENST00000364581 97 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 RNU6-996P-201ENST00000365438 107 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 MIR218-2-201ENST00000385006 110 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 NDUFS5P1-201ENST00000405668 289 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 OR9R1P-201ENST00000412200 877 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AC091390.3-201ENST00000426478 338 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 CACYBPP2-201ENST00000453625 678 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 HMGN2P16-201ENST00000456802 261 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AC006517.1-201ENST00000480485 328 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 PCBP2P3-201ENST00000509726 843 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 RN7SKP13-201ENST00000515933 244 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 IGKV2D-23-201ENST00000518179 286 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AC022695.1-201ENST00000522089 237 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AP005597.4-201ENST00000526762 229 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 OR5B19P-201ENST00000531766 928 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AL355375.2-201ENST00000574825 175 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AC015917.1-201ENST00000579654 510 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AC024619.4-201ENST00000580924 316 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 MIR4775-201ENST00000581168 75 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AC011712.1-201ENST00000588959 234 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 BDH2P1-201ENST00000602288 736 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AP001330.4-201ENST00000604350 154 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AC110741.2-201ENST00000605278 268 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AC040896.1-201ENST00000613819 479 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AC130324.3-201ENST00000614165 542 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AC008121.3-201ENST00000618726 433 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AL589994.2-201ENST00000621124 579 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 AC005858.4-201ENST00000623191 700 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.66□□□□□ -1.82
CCDC187A0A096LP49 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC187A0A096LP49 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC187A0A096LP49 AL672296.1-201ENST00000427780 2158 ntBASIC3.65□□□□□ -1.82
CCDC187A0A096LP49 RNU5A-1-201ENST00000362698 116 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 SMIM11P1-201ENST00000369586 178 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 RNU6-701P-201ENST00000384059 107 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 MIR199A2-201ENST00000385289 110 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 AC093106.2-201ENST00000428212 385 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 AP000907.1-201ENST00000428428 510 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 HMGB1P37-201ENST00000439613 609 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 AC020550.1-201ENST00000447385 163 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 RPS3AP46-201ENST00000448352 682 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 RPS29P15-201ENST00000458329 171 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 RN7SL585P-201ENST00000470538 280 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 SNORA31.8-201ENST00000516327 108 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 AC037471.2-201ENST00000564941 598 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 RPL23AP84-201ENST00000571193 464 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 AL133255.1-201ENST00000606374 441 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 DISC2.1-201ENST00000612827 205 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 AP001486.3-201ENST00000615334 372 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 AL591424.2-201ENST00000617023 128 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 uc_338.11-201ENST00000619132 160 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 MIR7975-201ENST00000619350 68 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 AC233309.1-201ENST00000619522 751 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 AC079684.1-201ENST00000621405 437 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 AC024940.5-201ENST00000622889 474 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 AC007998.5-201ENST00000622938 237 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 AC025034.2-201ENST00000623264 286 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 U6.114-201ENST00000636407 96 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms