Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 AC025031.4-201ENST00000621248 3271 ntBASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 OR14L1P-202ENST00000641545 3009 ntBASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 RNU6-1249P-201ENST00000363237 111 ntBASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 AL022722.2-201ENST00000402519 180 ntBASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 AL357515.1-201ENST00000402967 542 ntBASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 CYCSP33-201ENST00000414485 327 ntBASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 RPL7AP49-201ENST00000429522 581 ntBASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 AL591438.1-201ENST00000433508 581 ntBASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 AC092573.2-201ENST00000434546 243 ntBASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 RPL23AP83-201ENST00000434984 473 ntBASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 AC091868.1-201ENST00000508746 304 ntBASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 AL591034.3-201ENST00000605511 685 ntBASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 AC091979.2-201ENST00000607514 214 ntBASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 AL079305.1-201ENST00000623159 3008 ntBASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ZC3H4Q9UPT8 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 U8.8-201ENST00000365399 135 ntBASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 RNU6-1279P-201ENST00000383917 103 ntBASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 MIR215-201ENST00000384858 110 ntBASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 MIR554-201ENST00000384874 96 ntBASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 Y_RNA.592-201ENST00000410274 109 ntBASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 RNU2-14P-201ENST00000411053 191 ntBASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 EIF4EP2-201ENST00000422816 654 ntBASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 AC008716.1-201ENST00000511084 513 ntBASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 RNU6-911P-201ENST00000516523 104 ntBASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 DEFB108E-201ENST00000524692 240 ntBASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 RNA5SP108-201ENST00000605921 117 ntBASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 Z99571.1-201ENST00000636677 394 ntBASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 Z75746.1-201ENST00000440243 2080 ntBASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 AL121839.2-201ENST00000565058 6943 ntBASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 AL161912.2-201ENST00000565707 3007 ntBASIC5.76□□□□□ -1.49
ZC3H4Q9UPT8 HSPA8P1-201ENST00000425843 1833 ntBASIC5.75□□□□□ -1.49
ZC3H4Q9UPT8 RPL9P7-201ENST00000330965 580 ntBASIC5.75□□□□□ -1.49
ZC3H4Q9UPT8 SNORA62.3-201ENST00000365110 153 ntBASIC5.75□□□□□ -1.49
ZC3H4Q9UPT8 RNA5SP366-201ENST00000365454 123 ntBASIC5.75□□□□□ -1.49
ZC3H4Q9UPT8 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.75□□□□□ -1.49
ZC3H4Q9UPT8 U3.35-201ENST00000408405 208 ntBASIC5.75□□□□□ -1.49
ZC3H4Q9UPT8 RN7SKP16-201ENST00000410180 299 ntBASIC5.75□□□□□ -1.49
ZC3H4Q9UPT8 RN7SKP202-201ENST00000410439 330 ntBASIC5.75□□□□□ -1.49
ZC3H4Q9UPT8 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.75□□□□□ -1.49
ZC3H4Q9UPT8 AL592045.1-201ENST00000429867 352 ntBASIC5.75□□□□□ -1.49
ZC3H4Q9UPT8 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.75□□□□□ -1.49
ZC3H4Q9UPT8 AL513043.1-201ENST00000439124 535 ntBASIC5.75□□□□□ -1.49
ZC3H4Q9UPT8 AL590399.6-201ENST00000446396 307 ntBASIC5.75□□□□□ -1.49
ZC3H4Q9UPT8 RPL9P9-202ENST00000466501 579 ntBASIC5.75□□□□□ -1.49
ZC3H4Q9UPT8 RPL36AP41-201ENST00000493820 306 ntBASIC5.75□□□□□ -1.49
ZC3H4Q9UPT8 RNU5B-3P-201ENST00000516601 115 ntBASIC5.75□□□□□ -1.49
ZC3H4Q9UPT8 Y_RNA.719-201ENST00000517156 106 ntBASIC5.75□□□□□ -1.49
ZC3H4Q9UPT8 AC006557.5-201ENST00000603126 811 ntBASIC5.75□□□□□ -1.49
ZC3H4Q9UPT8 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.75□□□□□ -1.49
ZC3H4Q9UPT8 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms