Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM35Q9UPQ4 AC068647.1-201ENST00000489539 2265 ntBASIC6.74□□□□□ -1.33
TRIM35Q9UPQ4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.74□□□□□ -1.33
TRIM35Q9UPQ4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.74□□□□□ -1.33
TRIM35Q9UPQ4 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 AC078880.4-201ENST00000617627 1749 ntBASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 IQCB2P-201ENST00000401788 1633 ntBASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 MIR412-201ENST00000362142 91 ntBASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 RNA5SP52-201ENST00000362448 134 ntBASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 SNORA58B-201ENST00000364259 136 ntBASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 Y_RNA.251-201ENST00000364551 99 ntBASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 RNU6-281P-201ENST00000384212 103 ntBASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 AL591034.1-201ENST00000407447 340 ntBASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 AC009238.2-201ENST00000431026 355 ntBASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 AC093270.2-201ENST00000486157 792 ntBASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 RNU6-347P-201ENST00000516658 105 ntBASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 RNU6-143P-201ENST00000516942 93 ntBASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 AL358913.1-201ENST00000554342 121 ntBASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 MIR4782-201ENST00000577987 79 ntBASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 MIR5695-201ENST00000579717 85 ntBASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 AL450472.3-201ENST00000615578 367 ntBASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 MIR7155-201ENST00000615925 56 ntBASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 AP002799.1-201ENST00000623552 423 ntBASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM35Q9UPQ4 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 Y_RNA.294-201ENST00000364916 102 ntBASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 RNU6-541P-201ENST00000384709 110 ntBASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 MIR10B-201ENST00000385011 110 ntBASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 MIR548A3-201ENST00000385297 97 ntBASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 CYB5AP4-201ENST00000396692 399 ntBASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 AC013442.1-201ENST00000397347 228 ntBASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 RNU2-21P-201ENST00000410368 188 ntBASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 PPP1R11P2-201ENST00000423543 382 ntBASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 RNU6-966P-201ENST00000516479 104 ntBASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 RNU6-840P-201ENST00000517275 65 ntBASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 HMGN2P6-201ENST00000551091 273 ntBASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 Y_RNA.757-201ENST00000578934 114 ntBASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 AC234771.5-201ENST00000600161 514 ntBASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 uc_338.28-201ENST00000612082 187 ntBASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 AC092628.2-201ENST00000622492 339 ntBASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM35Q9UPQ4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
TRIM35Q9UPQ4 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
TRIM35Q9UPQ4 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
TRIM35Q9UPQ4 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 RNA5SP507-201ENST00000363603 121 ntBASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 SNORA72.2-201ENST00000365028 127 ntBASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 MIR92A2-201ENST00000385299 75 ntBASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 AL645927.1-201ENST00000396783 406 ntBASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 MTHFD2P2-201ENST00000407725 247 ntBASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 RN7SKP16-201ENST00000410180 299 ntBASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 AC090774.1-201ENST00000435925 246 ntBASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 AL353748.1-201ENST00000440753 474 ntBASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 AC146944.2-203ENST00000502493 354 ntBASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 AC098976.1-201ENST00000513014 541 ntBASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 AC139495.1-202ENST00000513164 354 ntBASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 AC008489.1-201ENST00000524271 483 ntBASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 AC044860.2-201ENST00000561005 179 ntBASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 AC040958.1-201ENST00000561102 201 ntBASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 MIR4691-201ENST00000583764 85 ntBASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 AC048347.1-201ENST00000624621 427 ntBASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 AL034408.1-202ENST00000636088 415 ntBASIC6.71□□□□□ -1.34
TRIM35Q9UPQ4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms