Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 RPL32P28-201ENST00000443577 397 ntBASIC2.48□□□□□ -2.01
CDH9Q9ULB4 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.48□□□□□ -2.01
CDH9Q9ULB4 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.48□□□□□ -2.01
CDH9Q9ULB4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH9Q9ULB4 AC013267.1-201ENST00000458227 267 ntBASIC2.48□□□□□ -2.01
CDH9Q9ULB4 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.48□□□□□ -2.01
CDH9Q9ULB4 LINC00888-204ENST00000487386 421 ntBASIC2.48□□□□□ -2.01
CDH9Q9ULB4 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH9Q9ULB4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH9Q9ULB4 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH9Q9ULB4 AC093281.2-201ENST00000510153 597 ntBASIC2.48□□□□□ -2.01
CDH9Q9ULB4 AC008549.1-201ENST00000512900 643 ntBASIC2.48□□□□□ -2.01
CDH9Q9ULB4 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH9Q9ULB4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.48□□□□□ -2.01
CDH9Q9ULB4 RNU6-390P-201ENST00000516259 103 ntBASIC2.48□□□□□ -2.01
CDH9Q9ULB4 RNA5SP290-201ENST00000517133 127 ntBASIC2.48□□□□□ -2.01
CDH9Q9ULB4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH9Q9ULB4 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.48□□□□□ -2.01
CDH9Q9ULB4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH9Q9ULB4 AL359212.1-201ENST00000556608 614 ntBASIC2.48□□□□□ -2.01
CDH9Q9ULB4 AC009063.1-201ENST00000563342 702 ntBASIC2.48□□□□□ -2.01
CDH9Q9ULB4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.48□□□□□ -2.01
CDH9Q9ULB4 AC091057.3-201ENST00000602684 733 ntBASIC2.48□□□□□ -2.01
CDH9Q9ULB4 RNU4-5P-201ENST00000607255 135 ntBASIC2.48□□□□□ -2.01
CDH9Q9ULB4 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.48□□□□□ -2.01
CDH9Q9ULB4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CDH9Q9ULB4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.48□□□□□ -2.01
CDH9Q9ULB4 MIR7515-201ENST00000637837 67 ntBASIC2.48□□□□□ -2.01
CDH9Q9ULB4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.48□□□□□ -2.01
CDH9Q9ULB4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CDH9Q9ULB4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CDH9Q9ULB4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CDH9Q9ULB4 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.47□□□□□ -2.01
CDH9Q9ULB4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CDH9Q9ULB4 AC007336.1-201ENST00000576365 3828 ntBASIC2.47□□□□□ -2.01
CDH9Q9ULB4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
CDH9Q9ULB4 MIR21-201ENST00000362134 72 ntBASIC2.47□□□□□ -2.01
CDH9Q9ULB4 RNU2-49P-201ENST00000410666 184 ntBASIC2.47□□□□□ -2.01
CDH9Q9ULB4 AC107081.1-201ENST00000414975 361 ntBASIC2.47□□□□□ -2.01
CDH9Q9ULB4 USP9YP26-201ENST00000421008 661 ntBASIC2.47□□□□□ -2.01
CDH9Q9ULB4 AC092648.1-201ENST00000425870 423 ntBASIC2.47□□□□□ -2.01
CDH9Q9ULB4 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH9Q9ULB4 USP12PX-201ENST00000432383 1057 ntBASIC2.47□□□□□ -2.01
CDH9Q9ULB4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.47□□□□□ -2.01
CDH9Q9ULB4 AL445687.1-201ENST00000439946 251 ntBASIC2.47□□□□□ -2.01
CDH9Q9ULB4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CDH9Q9ULB4 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH9Q9ULB4 AC105252.1-201ENST00000503089 286 ntBASIC2.47□□□□□ -2.01
CDH9Q9ULB4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH9Q9ULB4 MTND5P13-201ENST00000513046 1079 ntBASIC2.47□□□□□ -2.01
CDH9Q9ULB4 RNU6-927P-201ENST00000516199 100 ntBASIC2.47□□□□□ -2.01
CDH9Q9ULB4 RNU1-104P-201ENST00000517280 175 ntBASIC2.47□□□□□ -2.01
CDH9Q9ULB4 OR4R1P-201ENST00000529879 463 ntBASIC2.47□□□□□ -2.01
CDH9Q9ULB4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.47□□□□□ -2.01
CDH9Q9ULB4 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
CDH9Q9ULB4 AL133153.1-201ENST00000557756 303 ntBASIC2.47□□□□□ -2.01
CDH9Q9ULB4 AC105137.2-201ENST00000569073 466 ntBASIC2.47□□□□□ -2.01
CDH9Q9ULB4 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH9Q9ULB4 MIR3117-201ENST00000584034 78 ntBASIC2.47□□□□□ -2.01
CDH9Q9ULB4 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.47□□□□□ -2.01
CDH9Q9ULB4 AL592221.1-201ENST00000605266 382 ntBASIC2.47□□□□□ -2.01
CDH9Q9ULB4 RNU6-88P-201ENST00000606801 100 ntBASIC2.47□□□□□ -2.01
CDH9Q9ULB4 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.47□□□□□ -2.01
CDH9Q9ULB4 AC005858.4-201ENST00000623191 700 ntBASIC2.47□□□□□ -2.01
CDH9Q9ULB4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CDH9Q9ULB4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.47□□□□□ -2.01
CDH9Q9ULB4 MTND5P33-201ENST00000571250 1450 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CDH9Q9ULB4 SNORA67.1-201ENST00000364749 141 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 U8.8-201ENST00000365399 135 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 RNU6-636P-201ENST00000384598 107 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 RPL21P24-201ENST00000413752 448 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH9Q9ULB4 AL135786.1-201ENST00000415892 214 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH9Q9ULB4 USP9YP24-201ENST00000434374 697 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 SNRPEP9-201ENST00000436794 238 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 Z80107.1-201ENST00000436830 412 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 USP9YP17-201ENST00000444617 696 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 PTENP1-201ENST00000447117 1215 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 AC020550.1-201ENST00000447385 163 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CDH9Q9ULB4 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH9Q9ULB4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH9Q9ULB4 RN7SL429P-201ENST00000479090 223 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 RN7SL489P-201ENST00000486185 223 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 RN7SL327P-201ENST00000488659 223 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 RPS27P27-201ENST00000498779 255 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 EIF4EP3-201ENST00000498782 656 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 SCARNA17.1-201ENST00000516211 143 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 SCARNA17.2-201ENST00000516334 143 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 SCARNA11.3-201ENST00000517276 130 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH9Q9ULB4 AC027807.1-201ENST00000559921 996 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 AC005014.3-201ENST00000605985 190 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 AC004908.2-201ENST00000609090 574 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 AC013412.1-201ENST00000610687 192 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 AC013562.2-201ENST00000611632 603 ntBASIC2.46□□□□□ -2.02
CDH9Q9ULB4 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH9Q9ULB4 SCARNA17.4-201ENST00000614296 143 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms