Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
CNTN3Q9P232 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.99□□□□□ -1.61
CNTN3Q9P232 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CNTN3Q9P232 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.99□□□□□ -1.61
CNTN3Q9P232 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.99□□□□□ -1.61
CNTN3Q9P232 AL391684.1-202ENST00000641293 1636 ntBASIC4.99□□□□□ -1.61
CNTN3Q9P232 UBE2L2-201ENST00000254302 429 ntBASIC4.99□□□□□ -1.61
CNTN3Q9P232 SNORA51.11-201ENST00000384442 131 ntBASIC4.99□□□□□ -1.61
CNTN3Q9P232 Y_RNA.562-201ENST00000384695 113 ntBASIC4.99□□□□□ -1.61
CNTN3Q9P232 SDHCP2-201ENST00000398565 501 ntBASIC4.99□□□□□ -1.61
CNTN3Q9P232 AL096701.2-201ENST00000416920 238 ntBASIC4.99□□□□□ -1.61
CNTN3Q9P232 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.99□□□□□ -1.61
CNTN3Q9P232 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.99□□□□□ -1.61
CNTN3Q9P232 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.99□□□□□ -1.61
CNTN3Q9P232 RPS3AP46-201ENST00000448352 682 ntBASIC4.99□□□□□ -1.61
CNTN3Q9P232 AC133134.1-201ENST00000466800 359 ntBASIC4.99□□□□□ -1.61
CNTN3Q9P232 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.99□□□□□ -1.61
CNTN3Q9P232 RN7SKP46-201ENST00000515942 234 ntBASIC4.99□□□□□ -1.61
CNTN3Q9P232 MIR892C-201ENST00000516410 77 ntBASIC4.99□□□□□ -1.61
CNTN3Q9P232 RNU6-1315P-201ENST00000517187 99 ntBASIC4.99□□□□□ -1.61
CNTN3Q9P232 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.99□□□□□ -1.61
CNTN3Q9P232 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.99□□□□□ -1.61
CNTN3Q9P232 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.99□□□□□ -1.61
CNTN3Q9P232 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.99□□□□□ -1.61
CNTN3Q9P232 AL121917.1-203ENST00000605534 577 ntBASIC4.99□□□□□ -1.61
CNTN3Q9P232 AC007390.2-201ENST00000606229 3803 ntBASIC4.99□□□□□ -1.61
CNTN3Q9P232 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.99□□□□□ -1.61
CNTN3Q9P232 AL159153.1-201ENST00000619688 317 ntBASIC4.99□□□□□ -1.61
CNTN3Q9P232 AL353748.2-201ENST00000622148 471 ntBASIC4.99□□□□□ -1.61
CNTN3Q9P232 Z99571.1-201ENST00000636677 394 ntBASIC4.99□□□□□ -1.61
CNTN3Q9P232 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CNTN3Q9P232 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.99□□□□□ -1.61
CNTN3Q9P232 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CNTN3Q9P232 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CNTN3Q9P232 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.99□□□□□ -1.61
CNTN3Q9P232 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.98□□□□□ -1.61
CNTN3Q9P232 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
CNTN3Q9P232 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
CNTN3Q9P232 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CNTN3Q9P232 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
CNTN3Q9P232 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CNTN3Q9P232 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNTN3Q9P232 U8.8-201ENST00000365399 135 ntBASIC4.98□□□□□ -1.61
CNTN3Q9P232 RNU6-395P-201ENST00000365662 106 ntBASIC4.98□□□□□ -1.61
CNTN3Q9P232 Y_RNA.483-201ENST00000384380 101 ntBASIC4.98□□□□□ -1.61
CNTN3Q9P232 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CNTN3Q9P232 RNU4-61P-201ENST00000411243 107 ntBASIC4.98□□□□□ -1.61
CNTN3Q9P232 ELOCP19-201ENST00000411919 318 ntBASIC4.98□□□□□ -1.61
CNTN3Q9P232 AC016397.1-201ENST00000412463 242 ntBASIC4.98□□□□□ -1.61
CNTN3Q9P232 AC007098.1-201ENST00000420122 367 ntBASIC4.98□□□□□ -1.61
CNTN3Q9P232 AC244098.2-201ENST00000422068 99 ntBASIC4.98□□□□□ -1.61
CNTN3Q9P232 HSPD1P21-201ENST00000436541 245 ntBASIC4.98□□□□□ -1.61
CNTN3Q9P232 RANP8-201ENST00000444720 713 ntBASIC4.98□□□□□ -1.61
CNTN3Q9P232 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CNTN3Q9P232 AC073587.1-201ENST00000447093 876 ntBASIC4.98□□□□□ -1.61
CNTN3Q9P232 OR2AQ1P-201ENST00000451972 200 ntBASIC4.98□□□□□ -1.61
CNTN3Q9P232 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.98□□□□□ -1.61
CNTN3Q9P232 AC108751.2-201ENST00000469993 231 ntBASIC4.98□□□□□ -1.61
CNTN3Q9P232 HSPE1P6-201ENST00000479457 291 ntBASIC4.98□□□□□ -1.61
CNTN3Q9P232 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.98□□□□□ -1.61
CNTN3Q9P232 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.98□□□□□ -1.61
CNTN3Q9P232 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.98□□□□□ -1.61
CNTN3Q9P232 AC004584.2-201ENST00000570407 410 ntBASIC4.98□□□□□ -1.61
CNTN3Q9P232 AL390123.1-201ENST00000603216 237 ntBASIC4.98□□□□□ -1.61
CNTN3Q9P232 RAC1P9-201ENST00000604990 392 ntBASIC4.98□□□□□ -1.61
CNTN3Q9P232 AC008962.1-201ENST00000605729 304 ntBASIC4.98□□□□□ -1.61
CNTN3Q9P232 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.98□□□□□ -1.61
CNTN3Q9P232 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNTN3Q9P232 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNTN3Q9P232 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNTN3Q9P232 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CNTN3Q9P232 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CNTN3Q9P232 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CNTN3Q9P232 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
CNTN3Q9P232 Y_RNA.19-201ENST00000362462 99 ntBASIC4.97□□□□□ -1.61
CNTN3Q9P232 Y_RNA.518-201ENST00000384552 113 ntBASIC4.97□□□□□ -1.61
CNTN3Q9P232 MIR659-201ENST00000384963 97 ntBASIC4.97□□□□□ -1.61
CNTN3Q9P232 AL592291.1-201ENST00000403830 352 ntBASIC4.97□□□□□ -1.61
CNTN3Q9P232 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.97□□□□□ -1.61
CNTN3Q9P232 EI24P1-201ENST00000416584 867 ntBASIC4.97□□□□□ -1.61
CNTN3Q9P232 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.97□□□□□ -1.61
CNTN3Q9P232 AC139712.2-201ENST00000424302 339 ntBASIC4.97□□□□□ -1.61
CNTN3Q9P232 AL592045.1-201ENST00000429867 352 ntBASIC4.97□□□□□ -1.61
CNTN3Q9P232 ISCUP1-201ENST00000454451 448 ntBASIC4.97□□□□□ -1.61
CNTN3Q9P232 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CNTN3Q9P232 RN7SL481P-201ENST00000477764 299 ntBASIC4.97□□□□□ -1.61
CNTN3Q9P232 SUMO2P6-201ENST00000505273 288 ntBASIC4.97□□□□□ -1.61
CNTN3Q9P232 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.97□□□□□ -1.61
CNTN3Q9P232 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
CNTN3Q9P232 AC233702.9-201ENST00000581528 203 ntBASIC4.97□□□□□ -1.61
CNTN3Q9P232 MIR3976-201ENST00000606807 139 ntBASIC4.97□□□□□ -1.61
CNTN3Q9P232 AC096772.1-201ENST00000609146 564 ntBASIC4.97□□□□□ -1.61
CNTN3Q9P232 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.97□□□□□ -1.61
CNTN3Q9P232 AC130454.1-201ENST00000622948 401 ntBASIC4.97□□□□□ -1.61
CNTN3Q9P232 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.97□□□□□ -1.61
CNTN3Q9P232 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CNTN3Q9P232 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
CNTN3Q9P232 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CNTN3Q9P232 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.97□□□□□ -1.61
CNTN3Q9P232 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms