Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AL391840.1-201ENST00000571144 367 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 MTCO3P24-201ENST00000572729 782 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 AC103987.3-201ENST00000582071 292 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 AC067852.3-201ENST00000589177 561 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 GLUD1P4-201ENST00000590914 418 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 AC073648.5-201ENST00000603502 305 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 AC104763.2-201ENST00000604179 382 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 AC107294.1-201ENST00000609524 467 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 AL365204.3-201ENST00000612448 685 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 HULC.1-201ENST00000612720 240 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 AL162274.2-201ENST00000614406 332 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 AC007496.3-201ENST00000624987 3443 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 MTND5P27-201ENST00000428871 1720 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 FRG1CP-201ENST00000358464 769 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 RNU6-1097P-201ENST00000363586 107 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 Y_RNA.318-201ENST00000365131 97 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 RNU5A-6P-201ENST00000384136 116 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 Y_RNA.582-201ENST00000391023 95 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 AL354719.1-201ENST00000406535 843 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 RNU6-195P-201ENST00000411352 109 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 BX295541.1-201ENST00000417774 250 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 RPL31P35-201ENST00000431058 377 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 VN1R108P-201ENST00000431580 830 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 NEFMP1-201ENST00000443423 1006 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 RPL27AP5-201ENST00000469428 449 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 UBE2DNL-203ENST00000474922 222 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 AC004924.1-201ENST00000480160 781 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 AC110794.1-201ENST00000505816 425 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 AC006445.2-201ENST00000510061 472 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 HMGB1P41-201ENST00000520234 440 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 HIGD1AP1-201ENST00000550979 275 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 EIF4BP1-201ENST00000554881 351 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 LARP7P3-201ENST00000579888 337 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 AC006557.5-201ENST00000603126 811 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 HSPE1P7-201ENST00000604681 321 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 MIR98-201ENST00000606724 119 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 AC008498.1-201ENST00000613012 531 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 AL365361.1-201ENST00000566942 3481 ntBASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.3□□□□□ -1.88
POLR1BQ9H9Y6 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 RNA5SP383-201ENST00000362934 120 ntBASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 SNORD56.3-201ENST00000363507 71 ntBASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 RNU6-108P-201ENST00000365558 107 ntBASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 OR5H15-201ENST00000383696 930 ntBASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 Y_RNA.510-201ENST00000384511 114 ntBASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 RNU1-101P-201ENST00000391171 127 ntBASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 SNORA48.8-201ENST00000391324 134 ntBASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 RNA5SP38-201ENST00000410750 119 ntBASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 S100A11P2-201ENST00000467589 312 ntBASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 AL135752.1-201ENST00000479477 471 ntBASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 AC021205.2-201ENST00000480069 347 ntBASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 MTND4LP22-201ENST00000508209 276 ntBASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 RNU6-410P-201ENST00000517006 107 ntBASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 AC090572.1-201ENST00000519251 160 ntBASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 AC104027.1-201ENST00000521887 300 ntBASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 AC027807.1-201ENST00000559921 996 ntBASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 MIR4276-201ENST00000584832 70 ntBASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 SNORA50A-202ENST00000629536 136 ntBASIC3.29□□□□□ -1.88
POLR1BQ9H9Y6 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
POLR1BQ9H9Y6 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.28□□□□□ -1.88
POLR1BQ9H9Y6 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
POLR1BQ9H9Y6 MIR148B-201ENST00000362252 99 ntBASIC3.28□□□□□ -1.88
POLR1BQ9H9Y6 RNU6-1167P-201ENST00000363227 94 ntBASIC3.28□□□□□ -1.88
POLR1BQ9H9Y6 RNU6-1035P-201ENST00000384477 107 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms