Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.63□□□□□ -1.83
EBF3Q9H4W6 RN7SKP277-201ENST00000516895 283 ntBASIC3.63□□□□□ -1.83
EBF3Q9H4W6 AC090572.1-201ENST00000519251 160 ntBASIC3.63□□□□□ -1.83
EBF3Q9H4W6 SUB1P1-201ENST00000524415 382 ntBASIC3.63□□□□□ -1.83
EBF3Q9H4W6 SETP2-201ENST00000553886 926 ntBASIC3.63□□□□□ -1.83
EBF3Q9H4W6 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.63□□□□□ -1.83
EBF3Q9H4W6 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.63□□□□□ -1.83
EBF3Q9H4W6 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.63□□□□□ -1.83
EBF3Q9H4W6 AC007151.1-201ENST00000572774 483 ntBASIC3.63□□□□□ -1.83
EBF3Q9H4W6 AC007687.1-201ENST00000602704 304 ntBASIC3.63□□□□□ -1.83
EBF3Q9H4W6 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.63□□□□□ -1.83
EBF3Q9H4W6 Z84480.1-201ENST00000605131 311 ntBASIC3.63□□□□□ -1.83
EBF3Q9H4W6 AP003355.3-201ENST00000623465 114 ntBASIC3.63□□□□□ -1.83
EBF3Q9H4W6 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
EBF3Q9H4W6 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
EBF3Q9H4W6 EXOC5P1-201ENST00000510543 1969 ntBASIC3.63□□□□□ -1.83
EBF3Q9H4W6 OTUD4P1-201ENST00000237841 3067 ntBASIC3.63□□□□□ -1.83
EBF3Q9H4W6 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
EBF3Q9H4W6 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.63□□□□□ -1.83
EBF3Q9H4W6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
EBF3Q9H4W6 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 AC066616.2-201ENST00000559334 1481 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 SNORA32.2-201ENST00000384049 122 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 RNU6-1207P-201ENST00000384343 107 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 MIR1-2-201ENST00000384961 85 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 MRPL42P2-201ENST00000403169 426 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 NDUFB4P4-201ENST00000404822 243 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 MTHFD2P2-201ENST00000407725 247 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 RNU6-373P-201ENST00000411247 98 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 ELOCP4-201ENST00000420090 333 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 AC092832.1-201ENST00000422934 400 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 SRIP2-201ENST00000428470 166 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 RPL37P6-202ENST00000464216 403 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 RPL21P103-201ENST00000479921 488 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 RPL23AP41-201ENST00000484754 458 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 NDUFB4P9-201ENST00000511646 388 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 SNORA19.2-201ENST00000516013 114 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 RN7SKP234-201ENST00000517173 224 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 BTF3P12-201ENST00000519620 469 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 AC024224.1-201ENST00000538284 609 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 AC011602.1-201ENST00000546484 331 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 AC093249.1-201ENST00000567049 203 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 AC011471.1-201ENST00000585766 187 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 AC025588.3-201ENST00000604182 274 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 AC113139.1-201ENST00000605049 239 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 AL355472.4-201ENST00000610233 626 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 uc_338.5-201ENST00000611839 155 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 MTND4P35-201ENST00000604257 1375 ntBASIC3.62□□□□□ -1.83
EBF3Q9H4W6 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
EBF3Q9H4W6 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 ZNF734P-201ENST00000419494 1534 ntBASIC3.61□□□□□ -1.83
EBF3Q9H4W6 MTCO1P9-201ENST00000505577 1534 ntBASIC3.61□□□□□ -1.83
EBF3Q9H4W6 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 AL359893.1-201ENST00000447628 1580 ntBASIC3.61□□□□□ -1.83
EBF3Q9H4W6 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 SNORA38.1-201ENST00000364172 131 ntBASIC3.61□□□□□ -1.83
EBF3Q9H4W6 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 AP002088.1-201ENST00000382740 395 ntBASIC3.61□□□□□ -1.83
EBF3Q9H4W6 Y_RNA.431-201ENST00000384086 102 ntBASIC3.61□□□□□ -1.83
EBF3Q9H4W6 RNU6-474P-201ENST00000384243 107 ntBASIC3.61□□□□□ -1.83
EBF3Q9H4W6 SNORA48.2-201ENST00000390926 124 ntBASIC3.61□□□□□ -1.83
EBF3Q9H4W6 U3.29-201ENST00000391296 212 ntBASIC3.61□□□□□ -1.83
EBF3Q9H4W6 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 AL136116.1-201ENST00000403591 381 ntBASIC3.61□□□□□ -1.83
EBF3Q9H4W6 NDUFB4P5-201ENST00000415445 361 ntBASIC3.61□□□□□ -1.83
EBF3Q9H4W6 RPS12P23-201ENST00000419579 400 ntBASIC3.61□□□□□ -1.83
EBF3Q9H4W6 RPS15AP6-201ENST00000420703 385 ntBASIC3.61□□□□□ -1.83
EBF3Q9H4W6 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 USP9YP7-201ENST00000436723 430 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms