Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 RNU6-790P-201ENST00000384479 105 ntBASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 PTMAP2-201ENST00000397627 327 ntBASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 AL022722.2-201ENST00000402519 180 ntBASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 U3.32-201ENST00000408116 212 ntBASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 AC011998.1-201ENST00000433403 117 ntBASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 AC073063.1-201ENST00000434352 607 ntBASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 AC234775.1-201ENST00000454247 670 ntBASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 snoU13.24-201ENST00000458998 104 ntBASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 UQCRHP4-201ENST00000471686 272 ntBASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 RN7SL810P-201ENST00000493031 276 ntBASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 AC008958.1-201ENST00000511047 682 ntBASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 AC069113.1-201ENST00000517763 267 ntBASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 IGKV2D-36-201ENST00000518643 226 ntBASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 AC004584.2-201ENST00000570407 410 ntBASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 RPS29P30-201ENST00000600975 111 ntBASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 AC012669.1-201ENST00000603209 283 ntBASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 AC123786.2-201ENST00000603459 275 ntBASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 AL713866.2-201ENST00000603579 219 ntBASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 AL034351.1-201ENST00000605288 668 ntBASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 AC074140.1-201ENST00000621617 208 ntBASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 OR51H2P-202ENST00000641424 3046 ntBASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 NEAT1-202ENST00000501122 22743 ntBASIC5.19□□□□□ -1.58
UBE2OQ9C0C9 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 SALL4P2-201ENST00000423288 2910 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 AL359893.1-201ENST00000447628 1580 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 Y_RNA.237-201ENST00000364439 102 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 SNORD113-1-201ENST00000365321 69 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 RPL23AP26-201ENST00000412728 464 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 AC140479.3-201ENST00000418944 1126 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 RPL7AP61-201ENST00000443410 636 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 AC000111.2-201ENST00000448200 210 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 RPL37P6-201ENST00000460682 294 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 AL591473.1-201ENST00000464297 313 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 RPL7P23-201ENST00000493874 747 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 AC113155.1-201ENST00000511141 769 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 AC006499.6-201ENST00000511169 607 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 RNU6-911P-201ENST00000516523 104 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 Y_RNA.703-201ENST00000516846 111 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 RNU6-255P-201ENST00000516957 105 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 RNU6-1212P-201ENST00000517023 104 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 AC087369.1-201ENST00000520775 996 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 AL358913.1-201ENST00000554342 121 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 MIR4273-201ENST00000582824 84 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 AL158827.2-201ENST00000602494 330 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 AL355877.2-201ENST00000603670 358 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 AC005344.1-201ENST00000613391 459 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 AL691447.3-201ENST00000635020 330 ntBASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.18□□□□□ -1.58
UBE2OQ9C0C9 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
UBE2OQ9C0C9 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.17□□□□□ -1.58
UBE2OQ9C0C9 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
UBE2OQ9C0C9 ZNF137P-201ENST00000456718 1920 ntBASIC5.17□□□□□ -1.58
UBE2OQ9C0C9 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
UBE2OQ9C0C9 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
UBE2OQ9C0C9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
UBE2OQ9C0C9 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
UBE2OQ9C0C9 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.17□□□□□ -1.58
UBE2OQ9C0C9 SNORA73.1-201ENST00000363107 205 ntBASIC5.17□□□□□ -1.58
UBE2OQ9C0C9 PPIAP31-201ENST00000405422 495 ntBASIC5.17□□□□□ -1.58
UBE2OQ9C0C9 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.17□□□□□ -1.58
UBE2OQ9C0C9 AC104333.2-201ENST00000422630 192 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms