Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 RPL23AP91-201ENST00000569211 455 ntBASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 AC090615.1-201ENST00000577519 154 ntBASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 MIR4668-201ENST00000582284 70 ntBASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 MIR4480-201ENST00000582492 71 ntBASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 MIR4691-201ENST00000583764 85 ntBASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 RPL30P11-203ENST00000598995 310 ntBASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 AC005972.2-201ENST00000604690 348 ntBASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 RPL23AP88-201ENST00000605759 454 ntBASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 AC006329.2-201ENST00000611491 394 ntBASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 AC244107.2-201ENST00000611773 76 ntBASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 AC087385.3-201ENST00000620477 187 ntBASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 AP001784.1-201ENST00000624107 428 ntBASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 AC100757.1-201ENST00000616872 1835 ntBASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 AC004817.4-201ENST00000602396 3625 ntBASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-3Q9BYR4 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 AL049781.1-201ENST00000623195 3585 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 AC073073.2-201ENST00000609827 2578 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 NAMPTP1-201ENST00000440465 2514 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 SNURFL-201ENST00000309296 343 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 RNY3P2-201ENST00000362918 102 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 U3.3-201ENST00000362986 216 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 Y_RNA.111-201ENST00000363248 100 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 RNA5SP197-201ENST00000363357 119 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU6-1339P-201ENST00000363574 91 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 Y_RNA.236-201ENST00000364427 111 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU6-309P-201ENST00000364573 106 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU6-715P-201ENST00000365204 103 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 RNA5SP117-201ENST00000365294 118 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 Y_RNA.362-201ENST00000365518 110 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 Y_RNA.405-201ENST00000383979 100 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 Y_RNA.451-201ENST00000384200 100 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU6-318P-201ENST00000384283 103 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU6-933P-201ENST00000384424 107 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU6-649P-201ENST00000384463 107 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 Y_RNA.524-201ENST00000384564 100 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 Y_RNA.561-201ENST00000384694 100 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 Y_RNA.572-201ENST00000384757 98 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 SNORD73A-201ENST00000386062 65 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 SNORA12.2-201ENST00000391040 156 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 SNORA40.18-201ENST00000391200 128 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 RNA5SP241-201ENST00000391326 114 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 CYB5AP4-201ENST00000396692 399 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 AL645733.1-201ENST00000402250 217 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 RN7SKP16-201ENST00000410180 299 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 AC114491.1-201ENST00000416095 246 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 BTF3P4-201ENST00000418852 495 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 OR2AM1P-201ENST00000422137 422 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 RPL34P27-201ENST00000428810 349 ntBASIC1.78□□□□□ -2.12
KRTAP4-3Q9BYR4 CALM2P4-201ENST00000430810 426 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms