Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
USB1Q9BQ65 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
USB1Q9BQ65 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
USB1Q9BQ65 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USB1Q9BQ65 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.22□□□□□ -1.57
USB1Q9BQ65 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
USB1Q9BQ65 AL391516.1-201ENST00000554380 2449 ntBASIC5.22□□□□□ -1.57
USB1Q9BQ65 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.22□□□□□ -1.57
USB1Q9BQ65 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.22□□□□□ -1.57
USB1Q9BQ65 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.22□□□□□ -1.57
USB1Q9BQ65 Y_RNA.43-201ENST00000362670 111 ntBASIC5.22□□□□□ -1.57
USB1Q9BQ65 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.22□□□□□ -1.57
USB1Q9BQ65 MIR1290-201ENST00000408735 78 ntBASIC5.22□□□□□ -1.57
USB1Q9BQ65 AC015977.1-201ENST00000418887 292 ntBASIC5.22□□□□□ -1.57
USB1Q9BQ65 RPS3P2-201ENST00000421346 701 ntBASIC5.22□□□□□ -1.57
USB1Q9BQ65 OR2AM1P-201ENST00000422137 422 ntBASIC5.22□□□□□ -1.57
USB1Q9BQ65 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.22□□□□□ -1.57
USB1Q9BQ65 AC074290.1-201ENST00000448883 135 ntBASIC5.22□□□□□ -1.57
USB1Q9BQ65 RN7SL269P-201ENST00000467795 305 ntBASIC5.22□□□□□ -1.57
USB1Q9BQ65 AL121594.1-201ENST00000475906 575 ntBASIC5.22□□□□□ -1.57
USB1Q9BQ65 IGBP1P1-201ENST00000554337 1009 ntBASIC5.22□□□□□ -1.57
USB1Q9BQ65 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.22□□□□□ -1.57
USB1Q9BQ65 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.22□□□□□ -1.57
USB1Q9BQ65 CYCSP39-201ENST00000565821 309 ntBASIC5.22□□□□□ -1.57
USB1Q9BQ65 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.22□□□□□ -1.57
USB1Q9BQ65 MIR4660-201ENST00000583549 74 ntBASIC5.22□□□□□ -1.57
USB1Q9BQ65 DNAJC19P2-201ENST00000593340 302 ntBASIC5.22□□□□□ -1.57
USB1Q9BQ65 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.22□□□□□ -1.57
USB1Q9BQ65 DEFB117-201ENST00000602356 141 ntBASIC5.22□□□□□ -1.57
USB1Q9BQ65 AL512624.1-201ENST00000613638 469 ntBASIC5.22□□□□□ -1.57
USB1Q9BQ65 AC127024.6-201ENST00000621598 424 ntBASIC5.22□□□□□ -1.57
USB1Q9BQ65 AL355480.1-201ENST00000629041 99 ntBASIC5.22□□□□□ -1.57
USB1Q9BQ65 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.22□□□□□ -1.57
USB1Q9BQ65 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
USB1Q9BQ65 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USB1Q9BQ65 AC015813.6-201ENST00000624409 5808 ntBASIC5.22□□□□□ -1.57
USB1Q9BQ65 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.22□□□□□ -1.57
USB1Q9BQ65 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
USB1Q9BQ65 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USB1Q9BQ65 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.22□□□□□ -1.57
USB1Q9BQ65 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
USB1Q9BQ65 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
USB1Q9BQ65 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.21□□□□□ -1.57
USB1Q9BQ65 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
USB1Q9BQ65 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.57
USB1Q9BQ65 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.57
USB1Q9BQ65 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USB1Q9BQ65 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
USB1Q9BQ65 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.21□□□□□ -1.58
USB1Q9BQ65 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.21□□□□□ -1.58
USB1Q9BQ65 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USB1Q9BQ65 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USB1Q9BQ65 MIR375-201ENST00000362103 64 ntBASIC5.21□□□□□ -1.58
USB1Q9BQ65 RNU6-1298P-201ENST00000362456 101 ntBASIC5.21□□□□□ -1.58
USB1Q9BQ65 RNU6-873P-201ENST00000363833 107 ntBASIC5.21□□□□□ -1.58
USB1Q9BQ65 RNU6-1056P-201ENST00000383996 107 ntBASIC5.21□□□□□ -1.58
USB1Q9BQ65 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.21□□□□□ -1.58
USB1Q9BQ65 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.21□□□□□ -1.58
USB1Q9BQ65 TBCAP1-201ENST00000436520 327 ntBASIC5.21□□□□□ -1.58
USB1Q9BQ65 PDCD5P2-201ENST00000507570 312 ntBASIC5.21□□□□□ -1.58
USB1Q9BQ65 RNU6-155P-201ENST00000516347 100 ntBASIC5.21□□□□□ -1.58
USB1Q9BQ65 CYCSP23-201ENST00000519781 313 ntBASIC5.21□□□□□ -1.58
USB1Q9BQ65 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.21□□□□□ -1.58
USB1Q9BQ65 AC022616.8-201ENST00000533569 253 ntBASIC5.21□□□□□ -1.58
USB1Q9BQ65 AC018448.1-201ENST00000552843 316 ntBASIC5.21□□□□□ -1.58
USB1Q9BQ65 MED28P6-201ENST00000558776 231 ntBASIC5.21□□□□□ -1.58
USB1Q9BQ65 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.21□□□□□ -1.58
USB1Q9BQ65 MIR5571-201ENST00000577998 113 ntBASIC5.21□□□□□ -1.58
USB1Q9BQ65 AP005403.1-201ENST00000579720 229 ntBASIC5.21□□□□□ -1.58
USB1Q9BQ65 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC5.21□□□□□ -1.58
USB1Q9BQ65 AC004467.1-201ENST00000615678 330 ntBASIC5.21□□□□□ -1.58
USB1Q9BQ65 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.21□□□□□ -1.58
USB1Q9BQ65 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USB1Q9BQ65 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
USB1Q9BQ65 AC004925.1-201ENST00000624256 2706 ntBASIC5.21□□□□□ -1.58
USB1Q9BQ65 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
USB1Q9BQ65 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
USB1Q9BQ65 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
USB1Q9BQ65 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.21□□□□□ -1.58
USB1Q9BQ65 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
USB1Q9BQ65 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
USB1Q9BQ65 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.2□□□□□ -1.58
USB1Q9BQ65 RNU6-899P-201ENST00000363947 107 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 RNA5SP211-201ENST00000365516 117 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 RNU6-629P-201ENST00000384061 103 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 MIR143-201ENST00000385300 106 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 SNORA17A-201ENST00000391185 133 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.2□□□□□ -1.58
USB1Q9BQ65 DDX39BP1-205ENST00000422507 192 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.2□□□□□ -1.58
USB1Q9BQ65 SNRPEP9-201ENST00000436794 238 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 GPM6BP3-201ENST00000442797 145 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.2□□□□□ -1.58
USB1Q9BQ65 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.2□□□□□ -1.58
USB1Q9BQ65 Y_RNA.637-201ENST00000459424 114 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 SNRPGP7-201ENST00000469016 106 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 AC124945.1-201ENST00000485133 188 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 RN7SL591P-201ENST00000496150 292 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 AC008945.1-201ENST00000505144 499 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms