Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 MTND4P25-201ENST00000441039 533 ntBASIC4.13□□□□□ -1.75
CCDC136Q96JN2 PRDX3P3-201ENST00000447765 522 ntBASIC4.13□□□□□ -1.75
CCDC136Q96JN2 CYCSP35-201ENST00000451978 304 ntBASIC4.13□□□□□ -1.75
CCDC136Q96JN2 AC233702.1-201ENST00000482905 502 ntBASIC4.13□□□□□ -1.75
CCDC136Q96JN2 AC026427.2-201ENST00000506228 536 ntBASIC4.13□□□□□ -1.75
CCDC136Q96JN2 AC104619.4-201ENST00000510773 249 ntBASIC4.13□□□□□ -1.75
CCDC136Q96JN2 APOOP4-201ENST00000513530 597 ntBASIC4.13□□□□□ -1.75
CCDC136Q96JN2 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC136Q96JN2 AC103843.2-201ENST00000530523 682 ntBASIC4.13□□□□□ -1.75
CCDC136Q96JN2 AP002963.1-201ENST00000530590 184 ntBASIC4.13□□□□□ -1.75
CCDC136Q96JN2 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC136Q96JN2 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC136Q96JN2 AC087883.1-201ENST00000551882 391 ntBASIC4.13□□□□□ -1.75
CCDC136Q96JN2 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC136Q96JN2 AC092656.1-203ENST00000624134 423 ntBASIC4.13□□□□□ -1.75
CCDC136Q96JN2 AC093908.1-201ENST00000623125 8092 ntBASIC4.13□□□□□ -1.75
CCDC136Q96JN2 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC136Q96JN2 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC136Q96JN2 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCDC136Q96JN2 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCDC136Q96JN2 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCDC136Q96JN2 RNU6-960P-201ENST00000364056 120 ntBASIC4.12□□□□□ -1.75
CCDC136Q96JN2 RNU6-198P-201ENST00000384258 104 ntBASIC4.12□□□□□ -1.75
CCDC136Q96JN2 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC136Q96JN2 AL451062.2-201ENST00000427515 271 ntBASIC4.12□□□□□ -1.75
CCDC136Q96JN2 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC136Q96JN2 RPL23AP30-201ENST00000432419 501 ntBASIC4.12□□□□□ -1.75
CCDC136Q96JN2 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC136Q96JN2 ATP5C1P1-201ENST00000441945 895 ntBASIC4.12□□□□□ -1.75
CCDC136Q96JN2 AL136380.1-201ENST00000447970 162 ntBASIC4.12□□□□□ -1.75
CCDC136Q96JN2 MTCO2P18-201ENST00000457151 658 ntBASIC4.12□□□□□ -1.75
CCDC136Q96JN2 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC136Q96JN2 AC007182.2-201ENST00000489251 402 ntBASIC4.12□□□□□ -1.75
CCDC136Q96JN2 AC138853.1-201ENST00000503549 823 ntBASIC4.12□□□□□ -1.75
CCDC136Q96JN2 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC136Q96JN2 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC136Q96JN2 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.12□□□□□ -1.75
CCDC136Q96JN2 RPL21P12-201ENST00000559810 515 ntBASIC4.12□□□□□ -1.75
CCDC136Q96JN2 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC136Q96JN2 MTND1P15-201ENST00000579262 949 ntBASIC4.12□□□□□ -1.75
CCDC136Q96JN2 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC136Q96JN2 AL161729.4-201ENST00000604650 476 ntBASIC4.12□□□□□ -1.75
CCDC136Q96JN2 AC019159.1-201ENST00000605094 187 ntBASIC4.12□□□□□ -1.75
CCDC136Q96JN2 AC100793.4-201ENST00000613683 429 ntBASIC4.12□□□□□ -1.75
CCDC136Q96JN2 AC130324.3-201ENST00000614165 542 ntBASIC4.12□□□□□ -1.75
CCDC136Q96JN2 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC136Q96JN2 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CCDC136Q96JN2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC136Q96JN2 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC136Q96JN2 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC136Q96JN2 RNU4-35P-201ENST00000362588 141 ntBASIC4.11□□□□□ -1.75
CCDC136Q96JN2 RNU6-282P-201ENST00000365357 103 ntBASIC4.11□□□□□ -1.75
CCDC136Q96JN2 RNU6-641P-201ENST00000384006 107 ntBASIC4.11□□□□□ -1.75
CCDC136Q96JN2 RNU6-1119P-201ENST00000384349 108 ntBASIC4.11□□□□□ -1.75
CCDC136Q96JN2 MIR558-201ENST00000384920 94 ntBASIC4.11□□□□□ -1.75
CCDC136Q96JN2 MIR200C-201ENST00000384980 68 ntBASIC4.11□□□□□ -1.75
CCDC136Q96JN2 SNORA48.7-201ENST00000391302 135 ntBASIC4.11□□□□□ -1.75
CCDC136Q96JN2 RNA5SP492-201ENST00000411330 114 ntBASIC4.11□□□□□ -1.75
CCDC136Q96JN2 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC136Q96JN2 RPL37P6-201ENST00000460682 294 ntBASIC4.11□□□□□ -1.75
CCDC136Q96JN2 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC136Q96JN2 AC026403.1-201ENST00000518938 295 ntBASIC4.11□□□□□ -1.75
CCDC136Q96JN2 AC090572.1-201ENST00000519251 160 ntBASIC4.11□□□□□ -1.75
CCDC136Q96JN2 OR5B19P-201ENST00000531766 928 ntBASIC4.11□□□□□ -1.75
CCDC136Q96JN2 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC136Q96JN2 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC136Q96JN2 AC004805.2-201ENST00000605382 482 ntBASIC4.11□□□□□ -1.75
CCDC136Q96JN2 AL121992.2-201ENST00000606262 256 ntBASIC4.11□□□□□ -1.75
CCDC136Q96JN2 AL589743.7-201ENST00000612637 233 ntBASIC4.11□□□□□ -1.75
CCDC136Q96JN2 AC007998.5-201ENST00000622938 237 ntBASIC4.11□□□□□ -1.75
CCDC136Q96JN2 AC068880.5-201ENST00000624331 290 ntBASIC4.11□□□□□ -1.75
CCDC136Q96JN2 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC136Q96JN2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC136Q96JN2 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC136Q96JN2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC136Q96JN2 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC136Q96JN2 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC136Q96JN2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC136Q96JN2 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCDC136Q96JN2 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC136Q96JN2 SNORA51.4-201ENST00000364993 124 ntBASIC4.1□□□□□ -1.75
CCDC136Q96JN2 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCDC136Q96JN2 AC114491.1-201ENST00000416095 246 ntBASIC4.1□□□□□ -1.75
CCDC136Q96JN2 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC136Q96JN2 ELOCP14-201ENST00000428070 331 ntBASIC4.1□□□□□ -1.75
CCDC136Q96JN2 AL592045.1-201ENST00000429867 352 ntBASIC4.1□□□□□ -1.75
CCDC136Q96JN2 HSPD1P21-201ENST00000436541 245 ntBASIC4.1□□□□□ -1.75
CCDC136Q96JN2 ELOCP7-201ENST00000439968 331 ntBASIC4.1□□□□□ -1.75
CCDC136Q96JN2 RPS24P13-201ENST00000442520 397 ntBASIC4.1□□□□□ -1.75
CCDC136Q96JN2 AC106707.2-201ENST00000484182 374 ntBASIC4.1□□□□□ -1.75
CCDC136Q96JN2 AP002812.1-201ENST00000495378 474 ntBASIC4.1□□□□□ -1.75
CCDC136Q96JN2 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC136Q96JN2 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC136Q96JN2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC136Q96JN2 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC136Q96JN2 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC136Q96JN2 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC136Q96JN2 AC010653.1-201ENST00000571108 881 ntBASIC4.1□□□□□ -1.75
CCDC136Q96JN2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC136Q96JN2 AC245014.2-201ENST00000603689 287 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms