Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RHOT1P2-201ENST00000366423 333 ntBASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 USP9YP6-201ENST00000413550 854 ntBASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 SNRPEP10-201ENST00000420249 274 ntBASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 AL356867.1-201ENST00000429623 299 ntBASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 TXNP1-201ENST00000441872 371 ntBASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 CALM1P1-201ENST00000442082 433 ntBASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 DPPA3P1-201ENST00000448050 469 ntBASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 FABP5P13-201ENST00000452144 328 ntBASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 RPL21P104-201ENST00000464143 478 ntBASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 GMFBP1-201ENST00000467831 427 ntBASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 FCF1P3-201ENST00000496394 590 ntBASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 SNORA70.14-201ENST00000516205 110 ntBASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 MIR5004-201ENST00000579078 107 ntBASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 MIR4775-201ENST00000581168 75 ntBASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 AC002545.1-201ENST00000592511 181 ntBASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 AC104763.2-201ENST00000604179 382 ntBASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 AL162274.2-201ENST00000614406 332 ntBASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 uc_338.11-201ENST00000619132 160 ntBASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 MIR7154-201ENST00000620673 73 ntBASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 AC006020.1-201ENST00000420179 1854 ntBASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 API5P2-201ENST00000397055 1498 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 RNY3P3-201ENST00000363816 102 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 RNU6-61P-201ENST00000365528 109 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 RNU6-190P-201ENST00000384154 102 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 SNORD37.1-201ENST00000390968 65 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 AL031121.1-201ENST00000406553 254 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 RNA5SP129-201ENST00000410276 118 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 RNU6-387P-201ENST00000411331 105 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 AL513331.1-201ENST00000411908 397 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 AL451054.2-201ENST00000420896 202 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 CACYBPP2-201ENST00000453625 678 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 ANP32BP2-201ENST00000454525 545 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 RNU6-953P-201ENST00000459154 107 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 VN1R17P-201ENST00000472048 1090 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 PCBP2P3-201ENST00000509726 843 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 PPBPP1-201ENST00000510807 373 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 RNA5SP401-201ENST00000515920 127 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 RNU6-677P-201ENST00000516914 101 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 AC024619.4-201ENST00000580924 316 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 AP001029.3-201ENST00000588063 596 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 AC067852.3-201ENST00000589177 561 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 AL033523.1-201ENST00000605153 153 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 AC007619.2-201ENST00000605743 379 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 AC116312.1-201ENST00000606841 314 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 AC107294.1-201ENST00000609524 467 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 AL020991.1-201ENST00000612314 373 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 MIR3662-201ENST00000637030 95 ntBASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
TRIM43Q96BQ3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 UBE3AP2-201ENST00000429033 2259 ntBASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 RNU6-1029P-201ENST00000384109 107 ntBASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 HSPE1P26-201ENST00000405341 275 ntBASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 RPL5P18-201ENST00000406671 891 ntBASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 HMGB1P31-201ENST00000437242 427 ntBASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 MTCO3P18-201ENST00000440206 761 ntBASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 AC073415.1-201ENST00000449240 153 ntBASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms