Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TOMM20P4-201ENST00000427861 435 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.27□□□□□ -1.89
SNED1Q8TER0 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.27□□□□□ -1.89
SNED1Q8TER0 MTND4LP16-201ENST00000440828 295 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.27□□□□□ -1.89
SNED1Q8TER0 USP9YP12-201ENST00000450481 570 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC069439.1-201ENST00000494739 167 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC096725.1-201ENST00000514266 313 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.27□□□□□ -1.89
SNED1Q8TER0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 FAM60DP-201ENST00000524174 632 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC104383.1-201ENST00000530297 370 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 SLC2A13P1-201ENST00000531560 322 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC107954.1-201ENST00000565906 727 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC009101.1-201ENST00000568135 242 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC131902.3-201ENST00000611767 581 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC108479.2-201ENST00000617314 601 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SNED1Q8TER0 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC012150.2-201ENST00000621300 544 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 CRYM-AS1-204ENST00000637983 556 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SNED1Q8TER0 AP001350.1-201ENST00000601906 1524 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
SNED1Q8TER0 MTND4P23-201ENST00000447723 1363 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 MIR26A1-201ENST00000362205 77 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 RNU6-462P-201ENST00000362659 105 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 RNU6-181P-201ENST00000363225 107 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 RNY4P14-201ENST00000363656 96 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.26□□□□□ -1.89
SNED1Q8TER0 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SNED1Q8TER0 MT-TL1-201ENST00000386347 75 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 MT-TC-201ENST00000387405 66 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 RNU6-328P-201ENST00000390887 106 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 snosnR66.1-201ENST00000391095 99 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 AL451074.5-201ENST00000415894 435 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.26□□□□□ -1.89
SNED1Q8TER0 RPL7P30-201ENST00000420888 709 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 RPL36P19-201ENST00000430744 301 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 AC073614.1-201ENST00000438690 650 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 RAB11AP1-201ENST00000442978 646 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SNED1Q8TER0 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.26□□□□□ -1.89
SNED1Q8TER0 RPL39P6-201ENST00000448289 150 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 AP000542.1-201ENST00000448473 371 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 MTND1P11-201ENST00000456661 876 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 MTCYBP17-201ENST00000503579 789 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.26□□□□□ -1.89
SNED1Q8TER0 SNORA20.3-201ENST00000516880 132 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 IGKV3-31-201ENST00000523109 329 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.26□□□□□ -1.89
SNED1Q8TER0 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.26□□□□□ -1.89
SNED1Q8TER0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.26□□□□□ -1.89
SNED1Q8TER0 MIR4524B-201ENST00000581569 115 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 AC098826.3-201ENST00000603823 466 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 AL161729.4-201ENST00000604650 476 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 AC103710.4-201ENST00000609301 899 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 AC120349.2-201ENST00000625002 298 ntBASIC3.26□□□□□ -1.89
SNED1Q8TER0 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.26□□□□□ -1.89
SNED1Q8TER0 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.26□□□□□ -1.89
SNED1Q8TER0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNED1Q8TER0 ZNF734P-201ENST00000419494 1534 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SNED1Q8TER0 CASC19-280ENST00000642102 1351 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 AL359893.1-201ENST00000447628 1580 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNED1Q8TER0 MTND5P17-201ENST00000418405 1603 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 DBF4P1-201ENST00000412976 1892 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 RNA5SP295-201ENST00000362655 121 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 Y_RNA.402-201ENST00000383972 102 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 RNU6-444P-201ENST00000383988 108 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 MIR181A2-201ENST00000384863 110 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 MIR504-201ENST00000385065 83 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SNED1Q8TER0 MIR764-201ENST00000390811 85 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 MTCO3P40-201ENST00000392516 676 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 RN7SKP223-201ENST00000410582 62 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 AL136133.1-201ENST00000413694 376 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.25□□□□□ -1.89
SNED1Q8TER0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.25□□□□□ -1.89
SNED1Q8TER0 AC083875.1-201ENST00000419509 405 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.25□□□□□ -1.89
SNED1Q8TER0 AC012498.1-201ENST00000424037 437 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 RPL21P66-201ENST00000426566 466 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.25□□□□□ -1.89
SNED1Q8TER0 DPPA3P1-201ENST00000448050 469 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.25□□□□□ -1.89
SNED1Q8TER0 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 AL590639.1-201ENST00000456484 337 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 RPS27P23-201ENST00000487608 251 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 KCTD9P5-201ENST00000504141 1170 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 AC009646.1-201ENST00000510455 318 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 RNU6-583P-201ENST00000516012 92 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms