Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC110801.1-201ENST00000623590 212 ntBASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 AC021753.1-201ENST00000635724 168 ntBASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 PROS2P-201ENST00000474651 1951 ntBASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 RNU4-44P-201ENST00000363050 141 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 SNORD81.1-201ENST00000363064 77 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 Y_RNA.199-201ENST00000364014 102 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 RNU6-1027P-201ENST00000383998 107 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 Y_RNA.480-201ENST00000384364 102 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 RNU6-790P-201ENST00000384479 105 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 MIR92A2-201ENST00000385299 75 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 SNORD73A-201ENST00000386062 65 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 MRPL35P1-201ENST00000404272 572 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 U3.42-201ENST00000408746 214 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 RPS23P10-201ENST00000416185 486 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 AL031736.2-201ENST00000426573 787 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 ISCUP1-201ENST00000454451 448 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 RN7SL303P-201ENST00000469773 251 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 RPL31P60-201ENST00000478450 367 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 ACA59.1-201ENST00000515966 143 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 Y_RNA.713-201ENST00000517013 96 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 AC004024.1-201ENST00000549244 247 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 MIR4643-201ENST00000577473 78 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 AC174048.1-201ENST00000603389 144 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 RNU6-85P-201ENST00000605989 107 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 AC091979.2-201ENST00000607514 214 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 AP000560.1-201ENST00000624150 1937 ntBASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHKBP1Q8TBC3 AC011978.2-201ENST00000569835 2054 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 RNA5SP515-201ENST00000364570 118 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 SNORD50.2-201ENST00000365465 70 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 RNU6-81P-201ENST00000365608 104 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 SNORD115-46-201ENST00000390982 71 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 MIR1193-201ENST00000408109 78 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 RNA5SP296-201ENST00000410523 111 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 COX6CP10-201ENST00000416832 224 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 RPS12P10-201ENST00000427031 377 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 AC010655.1-201ENST00000449336 292 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 AC239809.1-201ENST00000450470 217 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 AC008481.1-201ENST00000463278 396 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 AC053481.1-201ENST00000467217 306 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 AC010631.1-201ENST00000474150 156 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 RN7SL810P-201ENST00000493031 276 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 AC074198.2-201ENST00000508153 258 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 AC067942.3-201ENST00000512025 362 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 RNU6-1278P-201ENST00000516130 107 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 RNU6-27P-201ENST00000516146 107 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 AC090151.1-201ENST00000520784 730 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 AL158827.2-201ENST00000602494 330 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 ARF4P1-201ENST00000605447 541 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 SNORD91B-202ENST00000608459 222 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 AL691447.3-201ENST00000635020 330 ntBASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHKBP1Q8TBC3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms