Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 OR51H2P-202ENST00000641424 3046 ntBASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 AC025031.4-201ENST00000621248 3271 ntBASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 AC107027.3-201ENST00000565095 3473 ntBASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 EOGT-210ENST00000615922 1931 ntBASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 RNU1-130P-201ENST00000363930 160 ntBASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 SNORA62-201ENST00000365493 153 ntBASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 UBBP2-201ENST00000376781 231 ntBASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 AL030996.1-201ENST00000411430 235 ntBASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 AL162725.1-201ENST00000435405 301 ntBASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 DAP3P1-201ENST00000441522 278 ntBASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 AC104073.1-201ENST00000451988 151 ntBASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 AC011276.1-201ENST00000469688 323 ntBASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 RPL21P103-201ENST00000479921 488 ntBASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 AC015795.1-201ENST00000513669 327 ntBASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 AC100870.1-201ENST00000522035 505 ntBASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 AC120057.2-201ENST00000571520 271 ntBASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 BPIFA4P-203ENST00000603168 689 ntBASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 AL591516.1-201ENST00000611326 274 ntBASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 MIR6891-201ENST00000618788 93 ntBASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 MIR6758-201ENST00000620653 63 ntBASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 A2MP1-204ENST00000566278 4130 ntBASIC5.29□□□□□ -1.56
NEDD1Q8NHV4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 AP001148.1-201ENST00000624124 2359 ntBASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 XIAPP3-201ENST00000312918 795 ntBASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 Y_RNA.439-201ENST00000384119 94 ntBASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 MTCYBP2-201ENST00000407745 171 ntBASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 Y_RNA.602-201ENST00000410535 92 ntBASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 Z74021.1-201ENST00000423610 407 ntBASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 AC006946.1-201ENST00000429106 328 ntBASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 AL353691.1-201ENST00000451332 387 ntBASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 AC012671.1-201ENST00000451912 203 ntBASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 RPL23AP24-201ENST00000458203 385 ntBASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 AC005798.1-201ENST00000513715 387 ntBASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 RNU6-1219P-201ENST00000516143 112 ntBASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 RN7SKP96-201ENST00000516948 297 ntBASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 AC093023.1-201ENST00000547375 507 ntBASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 SYF2P1-201ENST00000550658 413 ntBASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 AL160281.1-201ENST00000605307 311 ntBASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 AL121917.1-203ENST00000605534 577 ntBASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 AL590099.1-201ENST00000615276 138 ntBASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NEDD1Q8NHV4 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NEDD1Q8NHV4 SALL4P2-201ENST00000423288 2910 ntBASIC5.27□□□□□ -1.57
NEDD1Q8NHV4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.27□□□□□ -1.57
NEDD1Q8NHV4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NEDD1Q8NHV4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
NEDD1Q8NHV4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.27□□□□□ -1.57
NEDD1Q8NHV4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NEDD1Q8NHV4 RNA5SP509-201ENST00000364577 119 ntBASIC5.27□□□□□ -1.57
NEDD1Q8NHV4 AC068538.1-201ENST00000376856 336 ntBASIC5.27□□□□□ -1.57
NEDD1Q8NHV4 Y_RNA.441-201ENST00000384123 112 ntBASIC5.27□□□□□ -1.57
NEDD1Q8NHV4 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NEDD1Q8NHV4 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
NEDD1Q8NHV4 RNU5E-9P-201ENST00000411164 104 ntBASIC5.27□□□□□ -1.57
NEDD1Q8NHV4 RNA5SP111-201ENST00000411386 101 ntBASIC5.27□□□□□ -1.57
NEDD1Q8NHV4 RPS26P2-201ENST00000440331 348 ntBASIC5.27□□□□□ -1.57
NEDD1Q8NHV4 FHP1-201ENST00000442741 703 ntBASIC5.27□□□□□ -1.57
NEDD1Q8NHV4 SSXP4-201ENST00000451349 245 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms