Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 RNU1-15P-201ENST00000353977 144 ntBASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 Y_RNA.187-201ENST00000363918 113 ntBASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 SNORA75.4-201ENST00000391278 119 ntBASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 RNU6-1050P-201ENST00000410388 107 ntBASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 AL117339.3-201ENST00000418733 162 ntBASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 HMGN1P2-201ENST00000445197 310 ntBASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 RPL30P15-201ENST00000457129 321 ntBASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 U8.21-201ENST00000459536 136 ntBASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 RN7SL184P-201ENST00000488308 297 ntBASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 MTCYBP40-201ENST00000509390 1135 ntBASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 RNU6-615P-201ENST00000516065 106 ntBASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 RNU6-307P-201ENST00000516743 106 ntBASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 AL391261.3-201ENST00000557194 520 ntBASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 MRPS21P7-201ENST00000566937 238 ntBASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 AL121917.1-203ENST00000605534 577 ntBASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 AP000654.2-201ENST00000605633 586 ntBASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 AC004852.3-201ENST00000614131 326 ntBASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 RN7SL722P-201ENST00000617780 284 ntBASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 RN7SL565P-201ENST00000618246 284 ntBASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CLRN3Q8NCR9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 OTUD4P1-201ENST00000237841 3067 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 ZNF962P-201ENST00000443465 3140 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 Y_RNA.151-201ENST00000363566 112 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 RN7SKP280-201ENST00000364196 304 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 RNU6-827P-201ENST00000365553 106 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 Z98749.2-208ENST00000381646 500 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 RNU6-790P-201ENST00000384479 105 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 RNU6-306P-201ENST00000384617 107 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 Y_RNA.594-201ENST00000410373 140 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 AC016831.2-201ENST00000417179 352 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 CFL1P1-202ENST00000432948 411 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 AC098831.1-201ENST00000440661 216 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 NOTCH2P1-201ENST00000443481 624 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 ELOCP24-201ENST00000456370 334 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 snoU109.2-201ENST00000459316 135 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 RN7SL808P-201ENST00000496066 299 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 RNU6-377P-201ENST00000515965 102 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 AC012339.2-201ENST00000523996 453 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 TRAV32-201ENST00000553993 340 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 AC110491.1-201ENST00000562191 2010 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 AC012603.1-201ENST00000606424 528 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 AC009229.3-201ENST00000608056 282 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 MIR6134-201ENST00000617606 109 ntBASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLRN3Q8NCR9 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 ZFRP1-201ENST00000457579 2970 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 SRRM1P3-201ENST00000426911 2678 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 RNU6-898P-201ENST00000365627 104 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms