Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AC105129.3-201ENST00000605455 485 ntBASIC3.17□□□□□ -1.9
CCDC89Q8N998 RNU6-87P-201ENST00000607561 108 ntBASIC3.17□□□□□ -1.9
CCDC89Q8N998 AC100793.4-201ENST00000613683 429 ntBASIC3.17□□□□□ -1.9
CCDC89Q8N998 AC138932.5-201ENST00000617759 563 ntBASIC3.17□□□□□ -1.9
CCDC89Q8N998 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC89Q8N998 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC89Q8N998 MTCO1P12-201ENST00000414273 1543 ntBASIC3.17□□□□□ -1.9
CCDC89Q8N998 AC004944.1-201ENST00000517807 3059 ntBASIC3.17□□□□□ -1.9
CCDC89Q8N998 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC89Q8N998 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC89Q8N998 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC89Q8N998 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC89Q8N998 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC89Q8N998 MTND4P27-201ENST00000450813 1354 ntBASIC3.16□□□□□ -1.9
CCDC89Q8N998 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC89Q8N998 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC89Q8N998 SMIM11P1-201ENST00000369586 178 ntBASIC3.16□□□□□ -1.9
CCDC89Q8N998 RNU5A-2P-201ENST00000384337 116 ntBASIC3.16□□□□□ -1.9
CCDC89Q8N998 MIR134-201ENST00000385258 73 ntBASIC3.16□□□□□ -1.9
CCDC89Q8N998 TAS2R15P-201ENST00000390674 928 ntBASIC3.16□□□□□ -1.9
CCDC89Q8N998 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC89Q8N998 RNU6-1328P-201ENST00000410938 106 ntBASIC3.16□□□□□ -1.9
CCDC89Q8N998 MTND4P20-201ENST00000424125 869 ntBASIC3.16□□□□□ -1.9
CCDC89Q8N998 AC137499.1-201ENST00000427602 88 ntBASIC3.16□□□□□ -1.9
CCDC89Q8N998 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC89Q8N998 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC89Q8N998 AC104389.3-201ENST00000445629 235 ntBASIC3.16□□□□□ -1.9
CCDC89Q8N998 NIPA2P5-201ENST00000452282 464 ntBASIC3.16□□□□□ -1.9
CCDC89Q8N998 AC109925.1-201ENST00000478069 331 ntBASIC3.16□□□□□ -1.9
CCDC89Q8N998 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.16□□□□□ -1.9
CCDC89Q8N998 NDUFB4P2-201ENST00000509515 391 ntBASIC3.16□□□□□ -1.9
CCDC89Q8N998 BTF3P12-201ENST00000519620 469 ntBASIC3.16□□□□□ -1.9
CCDC89Q8N998 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC89Q8N998 ZNF321P-202ENST00000550843 495 ntBASIC3.16□□□□□ -1.9
CCDC89Q8N998 MIR5697-201ENST00000578045 78 ntBASIC3.16□□□□□ -1.9
CCDC89Q8N998 AC090616.2-202ENST00000584248 222 ntBASIC3.16□□□□□ -1.9
CCDC89Q8N998 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.16□□□□□ -1.9
CCDC89Q8N998 AC034229.5-201ENST00000624258 185 ntBASIC3.16□□□□□ -1.9
CCDC89Q8N998 AL512643.1-201ENST00000635735 524 ntBASIC3.16□□□□□ -1.9
CCDC89Q8N998 Z99571.1-201ENST00000636677 394 ntBASIC3.16□□□□□ -1.9
CCDC89Q8N998 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC89Q8N998 AC080128.1-201ENST00000474389 1917 ntBASIC3.16□□□□□ -1.9
CCDC89Q8N998 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC89Q8N998 AC108206.1-201ENST00000570186 4159 ntBASIC3.15□□□□□ -1.9
CCDC89Q8N998 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC89Q8N998 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC89Q8N998 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC89Q8N998 MRPL42P2-201ENST00000403169 426 ntBASIC3.15□□□□□ -1.91
CCDC89Q8N998 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC89Q8N998 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC89Q8N998 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC89Q8N998 AC097713.2-201ENST00000430199 356 ntBASIC3.15□□□□□ -1.91
CCDC89Q8N998 AL159987.2-201ENST00000432754 307 ntBASIC3.15□□□□□ -1.91
CCDC89Q8N998 AL591212.2-201ENST00000433923 257 ntBASIC3.15□□□□□ -1.91
CCDC89Q8N998 ZNF114P1-201ENST00000453500 292 ntBASIC3.15□□□□□ -1.91
CCDC89Q8N998 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC89Q8N998 AC233279.1-201ENST00000455300 423 ntBASIC3.15□□□□□ -1.91
CCDC89Q8N998 AC093899.1-201ENST00000457984 376 ntBASIC3.15□□□□□ -1.91
CCDC89Q8N998 AP004217.1-201ENST00000480579 346 ntBASIC3.15□□□□□ -1.91
CCDC89Q8N998 AIG1P1-201ENST00000503376 148 ntBASIC3.15□□□□□ -1.91
CCDC89Q8N998 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC89Q8N998 AC109329.2-201ENST00000519658 482 ntBASIC3.15□□□□□ -1.91
CCDC89Q8N998 AP003122.3-201ENST00000526316 255 ntBASIC3.15□□□□□ -1.91
CCDC89Q8N998 AC084851.1-201ENST00000529105 249 ntBASIC3.15□□□□□ -1.91
CCDC89Q8N998 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC89Q8N998 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
CCDC89Q8N998 AL121821.2-201ENST00000556081 394 ntBASIC3.15□□□□□ -1.91
CCDC89Q8N998 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.15□□□□□ -1.91
CCDC89Q8N998 AC034105.4-201ENST00000568304 277 ntBASIC3.15□□□□□ -1.91
CCDC89Q8N998 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC89Q8N998 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC89Q8N998 AC073544.2-201ENST00000601155 540 ntBASIC3.15□□□□□ -1.91
CCDC89Q8N998 AC091152.3-201ENST00000604227 325 ntBASIC3.15□□□□□ -1.91
CCDC89Q8N998 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC89Q8N998 AC104010.1-201ENST00000616889 150 ntBASIC3.15□□□□□ -1.91
CCDC89Q8N998 AL449363.1-201ENST00000617815 186 ntBASIC3.15□□□□□ -1.91
CCDC89Q8N998 MIR622-201ENST00000638396 96 ntBASIC3.15□□□□□ -1.91
CCDC89Q8N998 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC89Q8N998 TEX21P-201ENST00000447107 1476 ntBASIC3.15□□□□□ -1.91
CCDC89Q8N998 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CCDC89Q8N998 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
CCDC89Q8N998 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CCDC89Q8N998 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC89Q8N998 MTND5P30-201ENST00000452896 1731 ntBASIC3.14□□□□□ -1.91
CCDC89Q8N998 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CCDC89Q8N998 SNORA7.4-201ENST00000384249 137 ntBASIC3.14□□□□□ -1.91
CCDC89Q8N998 RNU6-19P-201ENST00000384718 107 ntBASIC3.14□□□□□ -1.91
CCDC89Q8N998 SNORD67-201ENST00000390833 111 ntBASIC3.14□□□□□ -1.91
CCDC89Q8N998 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC89Q8N998 MICF-203ENST00000432679 129 ntBASIC3.14□□□□□ -1.91
CCDC89Q8N998 AC006028.1-201ENST00000438379 402 ntBASIC3.14□□□□□ -1.91
CCDC89Q8N998 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC89Q8N998 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC89Q8N998 AL139824.2-201ENST00000458731 1095 ntBASIC3.14□□□□□ -1.91
CCDC89Q8N998 RPL30P6-201ENST00000475925 342 ntBASIC3.14□□□□□ -1.91
CCDC89Q8N998 AP000797.1-201ENST00000478870 387 ntBASIC3.14□□□□□ -1.91
CCDC89Q8N998 AC103975.1-201ENST00000482506 483 ntBASIC3.14□□□□□ -1.91
CCDC89Q8N998 AC008716.1-201ENST00000511084 513 ntBASIC3.14□□□□□ -1.91
CCDC89Q8N998 SNORA31.6-201ENST00000516241 130 ntBASIC3.14□□□□□ -1.91
CCDC89Q8N998 RNU7-51P-201ENST00000516560 62 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms